RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PSKH2Q96QS6 385 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 MAK16Q9BXY0 300 aaKnown RBP14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 LACRTQ9GZZ8 138 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 BRD8Q9H0E9 1235 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 NEUROG2Q9H2A3 272 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 DKK3Q9UBP4 350 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 SALL4Q9UJQ4 1053 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 GVINP1Q7Z2Y8 2422 aa14.03□□□□□ -0.16
PRKCSH-202ENST00000585540 EP300Q09472 2414 aaPredicted RBP14.02□□□□□ -0.16
PRKCSH-202ENST00000585540 A0A1W2PPC4 97 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 LRRD1A4D1F6 860 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 BNIP3LO60238 219 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 MAGEC1O60732 1142 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 LEFTY1O75610 366 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 CTSLP07711 333 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 COMTP21964 271 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 CES1P23141 567 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 IL4RP24394 825 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 GJC1P36383 396 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 GRIA4P48058 902 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 DNA2P51530 1060 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 AP1S1P61966 158 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 GALNT2Q10471 571 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 OVGP1Q12889 678 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 HNRNPDQ14103 355 aaKnown RBP14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TFDP2Q14188 446 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TEAD4Q15561 434 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 MYLK3Q32MK0 819 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 SLC45A4Q5BKX6 768 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 ZNF805Q5CZA5 627 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TRIM61Q5EBN2 209 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 NCBP2-AS2Q69YL0 99 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 KIAA1161Q6NSJ0 714 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 IL27RAQ6UWB1 636 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 NPWQ8N729 165 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 FRMD1Q8N878 549 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 OR14C36Q8NHC7 312 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 HDAC11Q96DB2 347 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 CELF6Q96J87 481 aaKnown RBP14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 ZNF641Q96N77 438 aaPredicted RBP14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TSGA13Q96PP4 275 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 RNF157Q96PX1 679 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TM6SF2Q9BZW4 377 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TNKS2Q9H2K2 1166 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 GOLPH3Q9H4A6 298 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 ZDHHC6Q9H6R6 413 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 PARD6AQ9NPB6 346 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 CD93Q9NPY3 652 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 TRIM10Q9UDY6 481 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 DUSP10Q9Y6W6 482 aa14.02□□□□□ -0.17
PRKCSH-202ENST00000585540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 LATO43561 262 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 BUB1BO60566 1050 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 KRT1P04264 644 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ITPKAP23677 461 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 CCNCP24863 283 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 CETN2P41208 172 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 GARSP41250 739 aaKnown RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 NUMBP49757 651 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 COPS2P61201 443 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ZNF235Q14590 738 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 LBRQ14739 615 aaKnown RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ARSIQ5FYB1 569 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 SLC9A4Q6AI14 798 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 NCEH1Q6PIU2 408 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 BRAT1Q6PJG6 821 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 DAAM2Q86T65 1068 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 FAM124AQ86V42 546 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 KATNAL2Q8IYT4 538 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 RYBPQ8N488 228 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 DCLK2Q8N568 766 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 RNF10Q8N5U6 811 aaKnown RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 TPCN2Q8NHX9 752 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 GRIN3AQ8TCU5 1115 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 SPOCK2Q92563 424 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ERLEC1Q96DZ1 483 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 RTKNQ9BST9 563 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 KCNF1Q9H3M0 494 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 C6orf106Q9H6K1 298 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ATP13A3Q9H7F0 1226 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 LHX3Q9UBR4 397 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 SERGEFQ9UGK8 458 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 SARDHQ9UL12 918 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 HYOU1Q9Y4L1 999 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ADGRG1Q9Y653 693 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ALG6Q9Y672 507 aa14.01□□□□□ -0.17
PRKCSH-202ENST00000585540 ZFHX2Q9C0A1 2572 aaPredicted RBP14□□□□□ -0.17
PRKCSH-202ENST00000585540 TSPAN11A1L157 253 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 J3KR12 359 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 KRIT1O00522 736 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 APOL1O14791 398 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 PPP1R12AO14974 1030 aaPredicted RBP14□□□□□ -0.17
PRKCSH-202ENST00000585540 BCAT2O15382 392 aaPredicted RBP14□□□□□ -0.17
PRKCSH-202ENST00000585540 TSPAN6O43657 245 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 KRT86O43790 486 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 MAFKO60675 156 aa14□□□□□ -0.17
PRKCSH-202ENST00000585540 ZRANB2O95218 330 aaKnown RBP eCLIP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms