RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ACTL7AQ9Y615 435 aa14.74□□□□□ -0.05
SDF2-202ENST00000585428 TSPAN6O43657 245 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 FLT3P36888 993 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 DNA2P51530 1060 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 CCNHP51946 323 aaPredicted RBP14.73□□□□□ -0.05
SDF2-202ENST00000585428 UCNP55089 124 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 PFN3P60673 137 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 SKOR1P84550 965 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 EIF2B5Q13144 721 aaKnown RBP14.73□□□□□ -0.05
SDF2-202ENST00000585428 SGCGQ13326 291 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 TPRG1LQ5T0D9 272 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 PTAR1Q7Z6K3 402 aaPredicted RBP14.73□□□□□ -0.05
SDF2-202ENST00000585428 PARGQ86W56 976 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 MAPK15Q8TD08 544 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 CENPTQ96BT3 561 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 PRR11Q96HE9 360 aaPredicted RBP14.73□□□□□ -0.05
SDF2-202ENST00000585428 RETREG1Q9H6L5 497 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 CPNE5Q9HCH3 593 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 ATP13A1Q9HD20 1204 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 EVA1BQ9NVM1 165 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 NCKIPSDQ9NZQ3 722 aa14.73□□□□□ -0.05
SDF2-202ENST00000585428 HECAQ9UBI9 543 aaPredicted RBP14.73□□□□□ -0.05
SDF2-202ENST00000585428 NYNRINQ9P2P1 1898 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 CAPN8A6NHC0 703 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 FPGTO14772 594 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 AQP9O43315 295 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 MTIF2P46199 727 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 TMPRSS3P57727 454 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 RHDQ02161 417 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 PDE1CQ14123 709 aaPredicted RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 DRAP1Q14919 205 aaPredicted RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 CDKN3Q16667 212 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 BROXQ5VW32 411 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 PARS2Q7L3T8 475 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 TPCN2Q8NHX9 752 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 RAB7BQ96AH8 199 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 CFAP57Q96MR6 1250 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 NAA15Q9BXJ9 866 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 NDST4Q9H3R1 872 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 NDFIP2Q9NV92 336 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 OR12D3Q9UGF7 316 aa14.72□□□□□ -0.05
SDF2-202ENST00000585428 IPO11Q9UI26 975 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 PNMA8BQ9ULN7 279 aaPredicted RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 FCF1Q9Y324 198 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 HELZ2Q9BYK8 2649 aaKnown RBP14.72□□□□□ -0.05
SDF2-202ENST00000585428 CPED1A4D0V7 1026 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 C16orf96A6NNT2 1141 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 H3BM21 787 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 KLK10O43240 276 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 GCATO75600 419 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 JUNDP17535 347 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 GKP32189 559 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 ADRA1BP35368 520 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 ACVRL1P37023 503 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 NRG1Q02297 640 aaPredicted RBP14.71□□□□□ -0.05
SDF2-202ENST00000585428 CAMK4Q16566 473 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 MAN2A1Q16706 1144 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 MYLK3Q32MK0 819 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 VWA3BQ502W6 1294 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 RAB6CQ53S08 254 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 C2CD6Q53TS8 623 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 ZNF805Q5CZA5 627 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 MIIPQ5JXC2 388 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 ARHGAP40Q5TG30 622 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 MANEALQ5VSG8 457 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 KLHDC7AQ5VTJ3 777 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 GUSBP11Q6P575 273 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 NLRP14Q86W24 1093 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 FAM131BQ86XD5 332 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 DRC7Q8IY82 874 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 MLKLQ8NB16 471 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 BTN2A2Q8WVV5 523 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 KCNE4Q8WWG9 221 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 TTC9Q92623 222 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 ARHGEF2Q92974 986 aaKnown RBP14.71□□□□□ -0.05
SDF2-202ENST00000585428 ATXN7L3BQ96GX2 97 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 BOCQ9BWV1 1114 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 RAB6CQ9H0N0 254 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 PDCL3Q9H2J4 239 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 THSD1Q9NS62 852 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 SATB2Q9UPW6 733 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 PCDHGA8Q9Y5G5 932 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 ENTPD2Q9Y5L3 495 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 PTPRQQ9UMZ3 2332 aa14.71□□□□□ -0.05
SDF2-202ENST00000585428 CDRT15L2A8MXV6 281 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 AREL1O15033 823 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 POP4O95707 220 aaKnown RBP14.7□□□□□ -0.06
SDF2-202ENST00000585428 LSM8O95777 96 aaKnown RBP14.7□□□□□ -0.06
SDF2-202ENST00000585428 ABL2P42684 1182 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 VAC14Q08AM6 782 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 BECN1Q14457 450 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 DEFB133Q30KQ1 61 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 EFL1Q7Z2Z2 1120 aaKnown RBP14.7□□□□□ -0.06
SDF2-202ENST00000585428 DENND6BQ8NEG7 585 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 LMX1AQ8TE12 382 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 CPA5Q8WXQ8 436 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 VCPIP1Q96JH7 1222 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 TBATAQ96M53 351 aa14.7□□□□□ -0.06
SDF2-202ENST00000585428 TUBGCP2Q9BSJ2 902 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms