RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 GSRP00390 522 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 UQCRHP07919 91 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 CHRM1P11229 460 aaPredicted RBP16.37■□□□□ 0.21
SS18-226ENST00000585241 GALK1P51570 392 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 GEMP55040 296 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 PLTPP55058 493 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 MAXP61244 160 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 RHOAP61586 193 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 DSC2Q02487 901 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 MPP3Q13368 585 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 PRPSAP1Q14558 356 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 IHHQ14623 411 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 DGKKQ5KSL6 1271 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 ANKRD22Q5VYY1 191 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 TXNDC11Q6PKC3 985 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 KDELC1Q6UW63 502 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 ATP11CQ8NB49 1132 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 FRS2Q8WU20 508 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 RPL10LQ96L21 214 aaKnown RBP16.37■□□□□ 0.21
SS18-226ENST00000585241 SEMA3CQ99985 751 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 FRMD8Q9BZ67 464 aaPredicted RBP16.37■□□□□ 0.21
SS18-226ENST00000585241 FOXP3Q9BZS1 431 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 CIPCQ9C0C6 399 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 PHACTR1Q9C0D0 580 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 ANAPC5Q9UJX4 755 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 AAR2Q9Y312 384 aaKnown RBP16.37■□□□□ 0.21
SS18-226ENST00000585241 PIAS3Q9Y6X2 628 aa16.37■□□□□ 0.21
SS18-226ENST00000585241 GOLGA6CA6NDK9 693 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 GOLGA6BA6NDN3 693 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 SHISA7A6NL88 538 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 INSIG1O15503 277 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 APRTP07741 180 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 GOLGA6DP0CG33 693 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 MYBL2P10244 700 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 TNFRSF4P43489 277 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 MAPK8P45983 427 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 AP1S1P61966 158 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 SKOR1P84550 965 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 E2F5Q15329 346 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 TMEM196Q5HYL7 178 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 NUDT18Q6ZVK8 323 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 ZCCHC9Q8N567 271 aaKnown RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 TAB3Q8N5C8 712 aaPredicted RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 PDCD7Q8N8D1 485 aaKnown RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 CYB5D2Q8WUJ1 264 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 SORCS1Q8WY21 1168 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 IFT81Q8WYA0 676 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 EZH1Q92800 747 aaPredicted RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 FBRSL1Q9HCM7 1045 aaKnown RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 HEBP1Q9NRV9 189 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 GOLGA6AQ9NYA3 693 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 THAP10Q9P2Z0 257 aaPredicted RBP16.36■□□□□ 0.21
SS18-226ENST00000585241 FAM153AQ9UHL3 310 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 SLCO3A1Q9UIG8 710 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 TTLL3Q9Y4R7 772 aa16.36■□□□□ 0.21
SS18-226ENST00000585241 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 NPC1O15118 1278 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 PPFIA2O75334 1257 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 IGSF6O95976 241 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 MT-CYBP00156 380 aaPredicted RBP16.35■□□□□ 0.21
SS18-226ENST00000585241 HNRNPLP14866 589 aaKnown RBP eCLIP16.35■□□□□ 0.211e-9■■■■■ 30.1
SS18-226ENST00000585241 ADRA1AP35348 466 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 NNMTP40261 264 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 MAGEA3P43357 314 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 SNRPD1P62314 119 aaKnown RBP16.35■□□□□ 0.21
SS18-226ENST00000585241 ENPP2Q13822 863 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
SS18-226ENST00000585241 BRD3Q15059 726 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 DLG2Q15700 870 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 NCEH1Q6PIU2 408 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 ZNF534Q76KX8 674 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 SFTPA1Q8IWL2 248 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 OR2AP1Q8NGE2 309 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 SPATA22Q8NHS9 363 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 VOPP1Q96AW1 172 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 NSMCE3Q96MG7 304 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 GDAP1L1Q96MZ0 367 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 RBM15Q96T37 977 aaKnown RBP eCLIP16.35■□□□□ 0.21
SS18-226ENST00000585241 LRRC40Q9H9A6 602 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 NOD2Q9HC29 1040 aa16.35■□□□□ 0.21
SS18-226ENST00000585241 CCDC151A5D8V7 595 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 WASH3PC4AMC7 463 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 E7EVH7 732 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 F5H423 210 aaPredicted RBP16.34■□□□□ 0.21
SS18-226ENST00000585241 K7EQS6 105 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 SERPINF2P08697 491 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 MLNP12872 115 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 BMP1P13497 986 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 DRD1P21728 446 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 CD86P42081 329 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 KIR2DL1P43626 348 aaPredicted RBP16.34■□□□□ 0.21
SS18-226ENST00000585241 ST8SIA6P61647 398 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 ITKQ08881 620 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 ZNF234Q14588 700 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 IER5LQ5T953 404 aa16.34■□□□□ 0.21
SS18-226ENST00000585241 NAPEPLDQ6IQ20 393 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms