RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC31A1O15431 190 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 CBFA2T3O75081 653 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 TMCC1O94876 653 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 CD160O95971 181 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 IGSF6O95976 241 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 ITGAVP06756 1048 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 FTH1P19P0C7X4 201 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 ADRB3P13945 408 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 NDST2P52849 883 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 TAS2R38P59533 333 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 RHOAP61586 193 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 SERINC3Q13530 473 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 ZNF805Q5CZA5 627 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 KIAA1161Q6NSJ0 714 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 GLRX5Q86SX6 157 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 DNAAF5Q86Y56 855 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 RAB7BQ96AH8 199 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 KLHDC7BQ96G42 594 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 SCNM1Q9BWG6 230 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 ERVMER34-1Q9H9K5 563 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 DOCK4Q8N1I0 1966 aa12.58□□□□□ -0.4
SS18-225ENST00000585121 C16orf96A6NNT2 1141 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 WNT9AO14904 365 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 AP1G1O43747 822 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 HYAL3O43820 417 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 HNRNPA2B1P22626 353 aaKnown RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 MIPP30301 263 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 PCK1P35558 622 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 NXPH1P58417 271 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 RPS21P63220 83 aaKnown RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 IL9RQ01113 521 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 SGCGQ13326 291 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 GSE1Q14687 1217 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 PPP6R3Q5H9R7 873 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 OR6K2Q8NGY2 324 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 KLK6Q92876 244 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 ARHGEF26Q96DR7 871 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 NOL6Q9H6R4 1146 aaKnown RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 FADS3Q9Y5Q0 445 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 EPG5Q9HCE0 2579 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 TSPAN6O43657 245 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 UGT2B4P06133 528 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 TPM1P09493 284 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 PRLRP16471 622 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 SPINK2P20155 84 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 ARL4AP40617 200 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 PIGHQ14442 188 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 GRM3Q14832 879 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 PRAMEF14Q5SWL7 426 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 ATXN7L2Q5T6C5 722 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 GDPD4Q6W3E5 623 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 PARS2Q7L3T8 475 aaKnown RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 CHCHD4Q8N4Q1 142 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 KLHL32Q96NJ5 620 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 KCTD15Q96SI1 283 aaPredicted RBP12.57□□□□□ -0.4
SS18-225ENST00000585121 MYOCQ99972 504 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 TRIM7Q9C029 511 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 FTSJ1Q9UET6 329 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 BTBD3Q9Y2F9 522 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 NEUROG3Q9Y4Z2 214 aa12.57□□□□□ -0.4
SS18-225ENST00000585121 GOLGA8CPA6NN73 597 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 H3BRJ5 948 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 TNFSF14O43557 240 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 LRCH4O75427 683 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 THEGLP0DJG4 465 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 XPAP23025 273 aaPredicted RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 CASP14P31944 242 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 GKP32189 559 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 RXRGP48443 463 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 HCAR3P49019 387 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 TRIM14Q14142 442 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 CA9Q16790 459 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 ST3GAL2Q16842 350 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 ALKBH5Q6P6C2 394 aaKnown RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 TTC7BQ86TV6 843 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 DCP2Q8IU60 420 aaKnown RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 LZTR1Q8N653 840 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 ARFGAP1Q8N6T3 406 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 BAHD1Q8TBE0 780 aaPredicted RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 CELF6Q96J87 481 aaKnown RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 PEBP4Q96S96 227 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 SLC17A9Q9BYT1 436 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 XPO4Q9C0E2 1151 aaKnown RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 LRRC19Q9H756 370 aa12.56□□□□□ -0.4
SS18-225ENST00000585121 ZNHIT6Q9NWK9 470 aaKnown RBP12.56□□□□□ -0.4
SS18-225ENST00000585121 IP6K2Q9UHH9 426 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms