RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	THEGL	P0DJG4	465 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	EPHA8	P29322	1005 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	AKT2	P31751	481 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CLDN2	P57739	230 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	FANCC	Q00597	558 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	OVGP1	Q12889	678 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	BNIP3	Q12983	259 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	MYLK3	Q32MK0	819 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PLEKHA7	Q6IQ23	1121 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PARS2	Q7L3T8	475 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	IQCH	Q86VS3	1027 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	OXR1	Q8N573	874 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	EID2	Q8N6I1	236 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	OR2AP1	Q8NGE2	309 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CALN1	Q9BXU9	219 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TRIM7	Q9C029	511 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	DHX35	Q9H5Z1	703 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ERVMER34-1	Q9H9K5	563 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TOR4A	Q9NXH8	423 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ZMIZ1	Q9ULJ6	1067 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	AP4E1	Q9UPM8	1137 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ZFR2	Q9UPR6	939 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	FADS3	Q9Y5Q0	445 aa		13.85	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CFAP47	Q6ZTR5	3102 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	USP24	Q9UPU5	2620 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TP53BP1	Q12888	1972 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CXorf51A	A0A1B0GTR3	108 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TMEM191C	A6NGB0	347 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	C16orf96	A6NNT2	1141 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	EEF2K	O00418	725 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	FGF10	O15520	208 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	DAPK3	O43293	454 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	RNF8	O76064	485 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	POP4	O95707	220 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	GZMA	P12544	262 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	HNRNPA2B1	P22626	353 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PRKCI	P41743	596 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	UBASH3A	P57075	661 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	YBEY	P58557	167 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	RHOA	P61586	193 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	RPS21	P63220	83 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CA9	Q16790	459 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PARP15	Q460N3	678 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TDRD12	Q587J7	1177 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ZNF805	Q5CZA5	627 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PLPP6	Q8IY26	295 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TMEM145	Q8NBT3	493 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CPLX3	Q8WVH0	158 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CELF6	Q96J87	481 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	FEM1C	Q96JP0	617 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CNDP2	Q96KP4	475 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	GDAP1L1	Q96MZ0	367 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	KLHL32	Q96NJ5	620 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	EDEM3	Q9BZQ6	932 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TTYH3	Q9C0H2	523 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	DMXL2	Q8TDJ6	3036 aa		13.84	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	FAM221B	A6H8Z2	402 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	WASH4P	A8MWX3	477 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PRPSAP2	O60256	369 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LDOC1	O95751	146 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	IGSF6	O95976	241 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PAK4	O96013	591 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	RXRG	P48443	463 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	DNAJC3	Q13217	504 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SGCG	Q13326	291 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SERINC3	Q13530	473 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	TMEM259	Q4ZIN3	620 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LRRC73	Q5JTD7	316 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ERMARD	Q5T6L9	678 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KIAA1161	Q6NSJ0	714 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	GDPD4	Q6W3E5	623 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	MARCH9	Q86YJ5	346 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	UMODL1-AS1	Q8N2C9	162 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ARFGAP1	Q8N6T3	406 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	KDF1	Q8NAX2	398 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	TRIM11	Q96F44	468 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	LRIG1	Q96JA1	1093 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	EXOC2	Q96KP1	924 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	PEBP4	Q96S96	227 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SNRNP25	Q9BV90	132 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	OSBPL1A	Q9BXW6	950 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SLC17A9	Q9BYT1	436 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	GGT7	Q9UJ14	662 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ITM2B	Q9Y287	266 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	SCIN	Q9Y6U3	715 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CABIN1	Q9Y6J0	2220 aa		13.83	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	CACNA1B	Q00975	2339 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	FAM149A	A5PLN7	773 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	TMEM8B	A6NDV4	472 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	IGLON5	A6NGN9	336 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	ENC1	O14682	589 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	AP1G1	O43747	822 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	MIP	P30301	263 aa		13.82	□□□□□ -0.2
CDK5RAP3-233	ENST00000584186	HTR7	P34969	479 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms