RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 NLGN3Q9NZ94 848 aa5.47□□□□□ -1.53
VAPA-207ENST00000583879 SLC12A6Q9UHW9 1150 aa5.47□□□□□ -1.53
VAPA-207ENST00000583879 PCDHGA8Q9Y5G5 932 aa5.47□□□□□ -1.53
VAPA-207ENST00000583879 SETXQ7Z333 2677 aaKnown RBP5.47□□□□□ -1.53
VAPA-207ENST00000583879 SHROOM3Q8TF72 1996 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 LY6G6EA0A0G2JKS1 128 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 FAM237AA0A1B0GTK4 181 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 EME2A4GXA9 379 aaPredicted RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 CDRT15L2A8MXV6 281 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 C9orf172C9J069 976 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 F5H5T6 163 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 M0QYV0 167 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 SART1O43290 800 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 SLC28A2O43868 658 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 NEBLO76041 1014 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TRUB2O95900 331 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 PAK4O96013 591 aaPredicted RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 IGLV3-25P01717 112 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 PDGFRAP16234 1089 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 PRLRP16471 622 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TGM2P21980 687 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 HNRNPA2B1P22626 353 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 AKT2P31751 481 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 SYKP43405 635 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ACADSBP45954 432 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 CSRP3P50461 194 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 NDUFA8P51970 172 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 HNRNPKP61978 463 aaKnown RBP eCLIP5.46□□□□□ -1.54
VAPA-207ENST00000583879 YWHAZP63104 245 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 FKBP3Q00688 224 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 NUMA1Q14980 2115 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ZNF542PQ5EBM4 170 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 DCAF17Q5H9S7 520 aaPredicted RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 C3orf38Q5JPI3 329 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 PIP5KL1Q5T9C9 394 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TTC39BQ5VTQ0 682 aaPredicted RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 KIAA1614Q5VZ46 1190 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ANKRD40Q6AI12 368 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 CXorf57Q6NSI4 855 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 FBXL22Q6P050 247 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 XKR5Q6UX68 686 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 KRBA2Q6ZNG9 492 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 Q6ZSR6 202 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ABI3BPQ7Z7G0 1075 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TMEM110Q86TL2 294 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TAC4Q86UU9 113 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 HORMAD1Q86X24 394 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 CHSY1Q86X52 802 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 SH2D3CQ8N5H7 860 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ATP6V0D2Q8N8Y2 350 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TMIEQ8NEW7 156 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 OR13H1Q8NG92 308 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 IFI44Q8TCB0 444 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 STK32AQ8WU08 396 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 KLK6Q92876 244 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 FAM149B1Q96BN6 582 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ATXN7L3BQ96GX2 97 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 PRR11Q96HE9 360 aaPredicted RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 NOX5Q96PH1 765 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 MED15Q96RN5 788 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 MDFIQ99750 246 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 MYOCQ99972 504 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 TRIM62Q9BVG3 475 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 CALN1Q9BXU9 219 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 THAP9Q9H5L6 903 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 CAAP1Q9H8G2 361 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 POPDC2Q9HBU9 364 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ST7Q9NRC1 585 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 IL17BQ9UHF5 180 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 SALL4Q9UJQ4 1053 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 SLC25A13Q9UJS0 675 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 SATB2Q9UPW6 733 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 PCDHB4Q9Y5E5 795 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 ENTPD2Q9Y5L3 495 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 OR51B4Q9Y5P0 310 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 HS3ST3A1Q9Y663 406 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 CSNK1G3Q9Y6M4 447 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 U3KQA8 63 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 KALRNO60229 2985 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 GOLGA4Q13439 2230 aaKnown RBP5.46□□□□□ -1.54
VAPA-207ENST00000583879 CABIN1Q9Y6J0 2220 aa5.46□□□□□ -1.54
VAPA-207ENST00000583879 FLNBO75369 2602 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 MUC22E2RYF6 1773 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 SPTY2D1-AS1A0A0U1RR47 76 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 A0A1W2PNU3 283 aaPredicted RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 CPED1A4D0V7 1026 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 POM121BA6NF01 834 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 TCAF2A6NFQ2 919 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 A6NNZ2 444 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 TPP1O14773 563 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 PMM2O15305 246 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 SLC16A3O15427 465 aaKnown RBP5.45□□□□□ -1.54
VAPA-207ENST00000583879 TNFSF15O95150 251 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 PCDH8O95206 1070 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 MT-CO1P00395 513 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CALCAP01258 141 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CSF2P04141 144 aa5.45□□□□□ -1.54
VAPA-207ENST00000583879 CTSLP07711 333 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms