RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 THAP10Q9P2Z0 257 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 LHX3Q9UBR4 397 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 WNT16Q9UBV4 365 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ASIC3Q9UHC3 531 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SNX24Q9Y343 169 aa16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MAN2B1O00754 1011 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 AOC1P19801 751 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NFKB1P19838 968 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CR2P20023 1033 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DRD1P21728 446 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CES1P23141 567 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 FDFT1P37268 417 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NNMTP40261 264 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MAXP61244 160 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 GUCY2DQ02846 1103 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ITKQ08881 620 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 NIPAL4Q0D2K0 466 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DLG2Q15700 870 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MLF2Q15773 248 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ALG1LQ6GMV1 187 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ARRDC2Q8TBH0 407 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 FAM3CQ92520 227 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TRIM31Q9BZY9 425 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 GBA3Q9H227 469 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 EPC1Q9H2F5 836 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 EPB41L5Q9HCM4 733 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HAUS2Q9NVX0 235 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 RSPH14Q9UHP6 348 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 F5P12259 2224 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 KIAA1549LQ6ZVL6 1849 aa16.59■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TARSL2A2RTX5 802 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ANTXRLA6NF34 631 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EGFP01133 1207 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HNRNPLP14866 589 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ITIH2P19823 946 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PSMB4P28070 264 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RPL21P46778 160 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RGRP47804 291 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CSNK1DP48730 415 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RHOAP61586 193 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ST8SIA6P61647 398 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PRKCQQ04759 706 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GRSF1Q12849 480 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 E2F5Q15329 346 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TRADDQ15628 312 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ACCSLQ4AC99 568 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TPRG1Q6ZUI0 275 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KLHDC8BQ8IXV7 354 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PLPP6Q8IY26 295 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TAB3Q8N5C8 712 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FRS2Q8WU20 508 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 IMP4Q96G21 291 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GORASP1Q9BQQ3 440 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 POLR1EQ9GZS1 481 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ANKZF1Q9H8Y5 726 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RAB6BQ9NRW1 208 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 WHRNQ9P202 907 aa16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.58■□□□□ 0.246e-10■□□□□ 8.2
CDK5RAP3-228ENST00000583363 TPX2Q9ULW0 747 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 V9GYY5 206 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TTC24A2A3L6 582 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TTC34A8MYJ7 566 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 DNALI1O14645 258 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MMP2P08253 660 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CHRM1P11229 460 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KIR2DL1P43626 348 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SCNN1BP51168 640 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FOXK2Q01167 660 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 DSC2Q02487 901 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SEMA5AQ13591 1074 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PRPSAP1Q14558 356 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZNF234Q14588 700 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 IHHQ14623 411 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CARD16Q5EG05 197 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FAXCQ5TGI0 409 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 C22orf39Q6P5X5 142 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PCGF5Q86SE9 256 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SRLQ86TD4 932 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PRPF39Q86UA1 669 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PCDH20Q8N6Y1 951 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 BBOF1Q8ND07 529 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MYRIPQ8NFW9 859 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TADA1Q96BN2 335 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SNF8Q96H20 258 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NUDCD1Q96RS6 583 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SEMA3CQ99985 751 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 DPH5Q9H2P9 285 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TMEM245Q9H330 911 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NOD2Q9HC29 1040 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SLC8A2Q9UPR5 921 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TTLL3Q9Y4R7 772 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GVINP1Q7Z2Y8 2422 aa16.57■□□□□ 0.24
CDK5RAP3-228ENST00000583363 F5H423 210 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NPC1O15118 1278 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms