RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SYDE1Q6ZW31 735 aaPredicted RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 SRLQ86TD4 932 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 PRPF39Q86UA1 669 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 CHPFQ8IZ52 775 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 BBS5Q8N3I7 341 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 TAB3Q8N5C8 712 aaPredicted RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 PCDH20Q8N6Y1 951 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 IL17RCQ8NAC3 791 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 CHST14Q8NCH0 376 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 OR2A12Q8NGT7 310 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 SPATA22Q8NHS9 363 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 ARRDC2Q8TBH0 407 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 EDAQ92838 391 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 PTPRN2Q92932 1015 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 IMP4Q96G21 291 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 SEMA3CQ99985 751 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 GORASP1Q9BQQ3 440 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 SLC25A51Q9H1U9 297 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 GBA3Q9H227 469 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 LMAN1LQ9HAT1 526 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 PAK5Q9P286 719 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 RSPH14Q9UHP6 348 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 MRPS17Q9Y2R5 130 aaKnown RBP9.67□□□□□ -0.86
RFFL-210ENST00000582308 TTLL3Q9Y4R7 772 aa9.67□□□□□ -0.86
RFFL-210ENST00000582308 MYLKQ15746 1914 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 EDDM13A0A1B0GTR0 161 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 TARSL2A2RTX5 802 aaKnown RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 DCXO43602 365 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 BNIP3LO60238 219 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 SIN3BO75182 1162 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 IGSF6O95976 241 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 GSRP00390 522 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 GKP32189 559 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 ACTN2P35609 894 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 SCNN1BP51168 640 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 CCNHP51946 323 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 SNRPD1P62314 119 aaKnown RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 SKOR1P84550 965 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 SLC7A5Q01650 507 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 GPS1Q13098 491 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 NUMA1Q14980 2115 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 E2F5Q15329 346 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 PARP6Q2NL67 630 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 MYLK3Q32MK0 819 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 FAXCQ5TGI0 409 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 ITPRIPL1Q6GPH6 555 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 C8orf74Q6P047 294 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 NCEH1Q6PIU2 408 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 C4orf22Q6V702 233 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 DPY19L3Q6ZPD9 716 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 Q6ZS52 159 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 KLHDC8BQ8IXV7 354 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 STK40Q8N2I9 435 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 TXNDC5Q8NBS9 432 aaKnown RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 OR2AP1Q8NGE2 309 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 OR6K2Q8NGY2 324 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 RPLP0P6Q8NHW5 317 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 TADA1Q96BN2 335 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 ERLEC1Q96DZ1 483 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 OXNAD1Q96HP4 312 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 GDAP1L1Q96MZ0 367 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 FCRL5Q96RD9 977 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 NUDCD1Q96RS6 583 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.86
RFFL-210ENST00000582308 FAM129BQ96TA1 746 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 NELL2Q99435 816 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 GABRG3Q99928 467 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 ERP44Q9BS26 406 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 MLPHQ9BV36 600 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 POLR1EQ9GZS1 481 aaKnown RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 PRSS16Q9NQE7 514 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 RAB6BQ9NRW1 208 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 POLR3BQ9NW08 1133 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 UBP1Q9NZI7 540 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 HECAQ9UBI9 543 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 SUN2Q9UH99 717 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 ASIC3Q9UHC3 531 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 EVLQ9UI08 416 aaPredicted RBP9.66□□□□□ -0.86
RFFL-210ENST00000582308 SLC8A2Q9UPR5 921 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 DOCK9Q9BZ29 2069 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 ZDBF2Q9HCK1 2354 aa9.66□□□□□ -0.86
RFFL-210ENST00000582308 LRRK1Q38SD2 2015 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 A0A1W2PQF6 199 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 BHMG1C9JSJ3 638 aaPredicted RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 STK25O00506 426 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 POP4O95707 220 aaKnown RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 MT-CYBP00156 380 aaPredicted RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
RFFL-210ENST00000582308 EPHX1P07099 455 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 CES1P23141 567 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 FDFT1P37268 417 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 ADCY8P40145 1251 aa9.65□□□□□ -0.86
RFFL-210ENST00000582308 CD86P42081 329 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms