RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CXCR5P32302 372 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 PSMD8P48556 350 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 EIF3EP60228 445 aaKnown RBP20.33■□□□□ 0.85
TOP3A-213ENST00000582230 SLC45A4Q5BKX6 768 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 ARSIQ5FYB1 569 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 RALGPS1Q5JS13 557 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 USP30Q70CQ3 517 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 GRIN3AQ8TCU5 1115 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 LRRN4Q8WUT4 740 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 PPP1R16AQ96I34 528 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 EXOC2Q96KP1 924 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 SPACA7Q96KW9 195 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 QKIQ96PU8 341 aaKnown RBP eCLIP20.33■□□□□ 0.85
TOP3A-213ENST00000582230 TUBGCP5Q96RT8 1024 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 IL12RB2Q99665 862 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 OSBPL1AQ9BXW6 950 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 FRMD8P1Q9BZ68 369 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-213ENST00000582230 ZDHHC6Q9H6R6 413 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 SARDHQ9UL12 918 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 SNX12Q9UMY4 172 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 NCKAP1Q9Y2A7 1128 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 ZKSCAN5Q9Y2L8 839 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 WASF2Q9Y6W5 498 aa20.33■□□□□ 0.85
TOP3A-213ENST00000582230 NYNRINQ9P2P1 1898 aaKnown RBP20.33■□□□□ 0.84
TOP3A-213ENST00000582230 CKAP5Q14008 2032 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 NUP205Q92621 2012 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 ZNF318Q5VUA4 2279 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 H7C0C1 242 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 MUSKO15146 869 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 MID1O15344 667 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 LEFTY1O75610 366 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 JCHAINP01591 159 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 CTSLP07711 333 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 P2RY2P41231 377 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 ATP5OP48047 213 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 TPMTP51580 245 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 AP1S1P61966 158 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 CCDC15Q0P6D6 951 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 MAP7D1Q3KQU3 841 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 SRLQ86TD4 932 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 KBTBD6Q86V97 674 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 C11orf74Q86VG3 221 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 CACUL1Q86Y37 369 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 CDKL3Q8IVW4 592 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-213ENST00000582230 C17orf53Q8N3J3 647 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-213ENST00000582230 PGBD5Q8N414 524 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 GAB3Q8WWW8 586 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 NUDCD1Q96RS6 583 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 WDR24Q96S15 920 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 OMDQ99983 421 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 POLR1EQ9GZS1 481 aaKnown RBP20.32■□□□□ 0.84
TOP3A-213ENST00000582230 NT5MQ9NPB1 228 aa20.32■□□□□ 0.84
TOP3A-213ENST00000582230 EVLQ9UI08 416 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-213ENST00000582230 TCRBV7S2A1N4TA0A589 114 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 KPNA3O00505 521 aaPredicted RBP20.31■□□□□ 0.84
TOP3A-213ENST00000582230 CES2O00748 559 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 LILRB5O75023 590 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 RPP40O75818 363 aaKnown RBP20.31■□□□□ 0.84
TOP3A-213ENST00000582230 FGGP02679 453 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 RBP3P10745 1247 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 CR2P20023 1033 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 RGRP47804 291 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 SCNN1BP51168 640 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 ALG1LQ6GMV1 187 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 GDPD4Q6W3E5 623 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 RASGEF1CQ8N431 466 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 OR6K2Q8NGY2 324 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 GANCQ8TET4 914 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 HTR3CQ8WXA8 447 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 ZNF641Q96N77 438 aaPredicted RBP20.31■□□□□ 0.84
TOP3A-213ENST00000582230 OSBPL9Q96SU4 736 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 VAT1Q99536 393 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 NAPGQ99747 312 aaPredicted RBP20.31■□□□□ 0.84
TOP3A-213ENST00000582230 DYRK4Q9NR20 520 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 FBXL12Q9NXK8 326 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 SEPT10Q9P0V9 454 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 TTC7AQ9ULT0 858 aaPredicted RBP20.31■□□□□ 0.84
TOP3A-213ENST00000582230 FZD4Q9ULV1 537 aa20.31■□□□□ 0.84
TOP3A-213ENST00000582230 CACNA1IQ9P0X4 2223 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-213ENST00000582230 BCLAF3A2AJT9 711 aaKnown RBP20.3■□□□□ 0.84
TOP3A-213ENST00000582230 CTAGE9A4FU28 777 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 PRLRP16471 622 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 TCP1P17987 556 aaKnown RBP20.3■□□□□ 0.84
TOP3A-213ENST00000582230 ITKQ08881 620 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 LONRF2Q1L5Z9 754 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 TEX44Q53QW1 395 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 ZNF805Q5CZA5 627 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 DARS2Q6PI48 645 aaKnown RBP20.3■□□□□ 0.84
TOP3A-213ENST00000582230 SLC36A4Q6YBV0 504 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 B4GALNT4Q76KP1 1039 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 HDDC3Q8N4P3 179 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 HCAR2Q8TDS4 363 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 RLN3Q8WXF3 142 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 ZNF419Q96HQ0 510 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-213ENST00000582230 NAP1L3Q99457 506 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-213ENST00000582230 ATP13A3Q9H7F0 1226 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 SCUBE2Q9NQ36 999 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 CYP8B1Q9UNU6 501 aa20.3■□□□□ 0.84
TOP3A-213ENST00000582230 ATP8A1Q9Y2Q0 1164 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms