RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	FEM1C	Q96JP0	617 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GDAP1L1	Q96MZ0	367 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CPEB1	Q9BZB8	566 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LRRC19	Q9H756	370 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	IFNK	Q9P0W0	207 aa		12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	FCF1	Q9Y324	198 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SPAAR	A0A1B0GVQ0	90 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708		A0A1W2PQU0	124 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ARHGAP42	A6NI28	874 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	EEF2K	O00418	725 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PLK4	O00444	970 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LRCH4	O75427	683 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	IGSF6	O95976	241 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	WNT1	P04628	370 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	GYPC	P04921	128 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CDK4	P11802	303 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HNRNPA2B1	P22626	353 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MIP	P30301	263 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	AKT2	P31751	481 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DNA2	P51530	1060 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	FOXC1	Q12948	553 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZNF284	Q2VY69	593 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	POM121L1P	Q3SYA9	428 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMEM259	Q4ZIN3	620 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	KCNT1	Q5JUK3	1230 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMCO4	Q5TGY1	634 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RFX8	Q6ZV50	586 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZNF354C	Q86Y25	554 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ARFGAP1	Q8N6T3	406 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RHBDD1	Q8TEB9	315 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ADAMTS14	Q8WXS8	1223 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	IFT43	Q96FT9	208 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CNTNAP3B	Q96NU0	1288 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	1e-6	■□□□□ 8
CDK5RAP3-222	ENST00000581708	SNRNP25	Q9BV90	132 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CNTNAP3	Q9BZ76	1288 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MAGEB5	Q9BZ81	275 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DHX35	Q9H5Z1	703 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZDHHC6	Q9H6R6	413 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DKK3	Q9UBP4	350 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	FADS3	Q9Y5Q0	445 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HS3ST3A1	Q9Y663	406 aa		12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMEM8B	A6NDV4	472 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DAPK3	O43293	454 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ATMIN	O43313	823 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TNFSF14	O43557	240 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PRAMEF11	O60813	436 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMCC1	O94876	653 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DKK1	O94907	266 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PCDH8	O95206	1070 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CYP1A2	P05177	515 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MAT2A	P31153	395 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RHOA	P61586	193 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RFTN1	Q14699	578 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	DPYSL2	Q16555	572 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	AFMID	Q63HM1	303 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	SPECC1L	Q69YQ0	1117 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ALKBH5	Q6P6C2	394 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	RYBP	Q8N488	228 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TEKT4	Q8WW24	435 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	HMCES	Q96FZ2	354 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	KLHDC7B	Q96G42	594 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	CAMK1G	Q96NX5	476 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	LENG8	Q96PV6	779 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TM6SF2	Q9BZW4	377 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	ZWILCH	Q9H900	591 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MYO1A	Q9UBC5	1043 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	UBA2	Q9UBT2	640 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	PCSK1N	Q9UHG2	260 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	IP6K2	Q9UHH9	426 aa		12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	COL5A1	P20908	1838 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	MAP1B	P46821	2468 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-222	ENST00000581708	TMEM131	Q92545	1883 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708		A0A087X0T9	212 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	C16orf96	A6NNT2	1141 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708		H3BRJ5	948 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	KRIT1	O00522	736 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	TOR1B	O14657	336 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	WNT9A	O14904	365 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	TPM1	P09493	284 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	FTH1P19	P0C7X4	201 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	FAM228B	P0C875	321 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	ERCC2	P18074	760 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	EPHA8	P29322	1005 aa	Predicted RBP	12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	ARL4A	P40617	200 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	CSNK1D	P48730	415 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	FAM193A	P78312	1265 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	TSR1	Q2NL82	804 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	LAYN	Q6UX15	382 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	GDPD4	Q6W3E5	623 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	PARS2	Q7L3T8	475 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	ABI3BP	Q7Z7G0	1075 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	DNAAF5	Q86Y56	855 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	DENND6B	Q8NEG7	585 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	OR8K1	Q8NGG5	319 aa		12.77	□□□□□ -0.37
CDK5RAP3-222	ENST00000581708	SAP25	Q8TEE9	199 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms