RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 DPP6P42658 865 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 ARSFP54793 590 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 ID2Q02363 134 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 DCTN2Q13561 401 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 ME3Q16798 604 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 EDRF1Q3B7T1 1238 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TTC39AQ5SRH9 613 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TBC1D9BQ66K14 1250 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TMEM81Q6P7N7 255 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 RRM2BQ7LG56 351 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 IRF2BP2Q7Z5L9 587 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 CPLX4Q7Z7G2 160 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TRIM74Q86UV6 250 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TRIM73Q86UV7 250 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 PIM3Q86V86 326 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 CNTROBQ8N137 903 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 RASSF8Q8NHQ8 419 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 METTL6Q8TCB7 284 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 GDPD5Q8WTR4 605 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 HDAC7Q8WUI4 952 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 CLMNQ96JQ2 1002 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 KLHL15Q96M94 604 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 SPAG4Q9NPE6 437 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 SNTG1Q9NSN8 517 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TAS2R10Q9NYW0 307 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 FBXO40Q9UH90 709 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 PCDHGB5Q9Y5G0 923 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 CLDN16Q9Y5I7 305 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 ARHGAP10A1A4S6 786 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 SLC25A17O43808 307 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 TACC1O75410 805 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 TMEM63AO94886 807 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 GALTP07902 379 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 FMO4P31512 558 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 ABCD1P33897 745 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 CLCNKBP51801 687 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 CYP4A11Q02928 519 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 NEXNQ0ZGT2 675 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 TBCEQ15813 527 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 SMTNL2Q2TAL5 461 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 INO80CQ6PI98 192 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 C4orf50Q6ZRC1 276 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 TADA2BQ86TJ2 420 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 FAM160B2Q86V87 743 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 ANKRD13BQ86YJ7 626 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 ZDHHC17Q8IUH5 632 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 SAMD14Q8IZD0 417 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 SLC25A41Q8N5S1 370 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 DPP10Q8N608 796 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 LRRC57Q8N9N7 239 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 ANKRD52Q8NB46 1076 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 CENPIQ92674 756 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 ATOH1Q92858 354 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 NR1H4Q96RI1 486 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 THSD1Q9NS62 852 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 BLOC1S4Q9NUP1 217 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 HSPB7Q9UBY9 170 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 RAP2CQ9Y3L5 183 aa4.98□□□□□ -1.61
SMCHD1-205ENST00000581383 ZNF335Q9H4Z2 1342 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 KDM3AQ9Y4C1 1321 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 A0A1W2PPC1 479 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 PGPEP1LA6NFU8 196 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 FAM157AC9JC47 383 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 TLR2O60603 784 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 USO1O60763 962 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 POLD2P49005 469 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 CTCFP49711 727 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 BLKP51451 505 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 TMPRSS3P57727 454 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 DCAF7P61962 342 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 GAD2Q05329 585 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 KLHL22Q53GT1 634 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 PIK3CD-AS1Q5SR53 167 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 KDELC2Q7Z4H8 507 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 ADAMTS15Q8TE58 950 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 KLHL29Q96CT2 875 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 SAAL1Q96ER3 474 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 MSRB1Q9NZV6 116 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 MPP6Q9NZW5 540 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 TBC1D14Q9P2M4 693 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 ADGRF5Q8IZF2 1346 aa4.97□□□□□ -1.61
SMCHD1-205ENST00000581383 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 A6NNC1 897 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 F5H0A9 414 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 RNMTO43148 476 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 TGFB1I1O43294 461 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 DDX58O95786 925 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 HSPA1AP0DMV8 641 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 HSPA1BP0DMV9 641 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 CHRNB1P11230 501 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 UNGP13051 313 aaPredicted RBP4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 PRF1P14222 555 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 CHMP24386 653 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 YWHAQP27348 245 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 CCKBRP32239 447 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 RGS2P41220 211 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 CASP2P42575 452 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 ME1P48163 572 aa4.96□□□□□ -1.62
SMCHD1-205ENST00000581383 EIF5P55010 431 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms