RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 NOMO1Q15155 1222 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 DDR2Q16832 855 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 CCDC142Q17RM4 750 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 INSCQ1MX18 579 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 KHDRBS2Q5VWX1 349 aaKnown RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 RNF43Q68DV7 783 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 C16orf46Q6P387 395 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PRRT2Q7Z6L0 340 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SPPL2AQ8TCT8 520 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PCDHB18PQ96TA0 734 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 ABCB1P08183 1280 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 FAM58BPP0C7Q3 252 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SULT2A1Q06520 285 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 C1DQ13901 141 aaKnown RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PTPN20Q4JDL3 420 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 CHMP1BQ7LBR1 199 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PIWIL4Q7Z3Z4 852 aaKnown RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 FAM228AQ86W67 206 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PPP1R13LQ8WUF5 828 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 BTN2A3PQ96KV6 586 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 FCRL2Q96LA5 508 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 CEP44Q9C0F1 390 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 ANKDD1BA6NHY2 528 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PRR23D1E9PI22 279 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 INPP4BO15327 924 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 EPN2O95208 641 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PRR23D2P0DMB1 279 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 BRCC3P46736 316 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PLK1P53350 603 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 IRF8Q02556 426 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 FAM46CQ5VWP2 391 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SPRYD7Q5W111 196 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 ADAMTSL2Q86TH1 951 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 LGMNQ99538 433 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 ENTPD4Q9Y227 616 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 ITGA2BP08514 1039 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 THOP1P52888 689 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 OASLQ15646 514 aaKnown RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 PDK4Q16654 411 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 ZDHHC20Q5W0Z9 365 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 JOSD2Q8TAC2 188 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 USP7Q93009 1102 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 C9orf16Q9BUW7 83 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 SEZ6LQ9BYH1 1024 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 VPS45Q9NRW7 570 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 CCDC167Q9P0B6 97 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 CLDN11O75508 207 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 ANXA6P08133 673 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 COX7A2P14406 83 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 IRX1P78414 480 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 CRADDP78560 199 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 MBTD1Q05BQ5 628 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 KRR1Q13601 381 aaKnown RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 OR6Y1Q8NGX8 325 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 ZBTB10Q96DT7 871 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 PPP3R2Q96LZ3 170 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 TMEM79Q9BSE2 394 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 KIAA1522Q9P206 1035 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 RPL3P39023 403 aaKnown RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 MRPS15P82914 257 aaKnown RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 PARP15Q460N3 678 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 AADATQ8N5Z0 425 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 HEXDCQ8WVB3 486 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 SEPHS2Q99611 448 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 SYBUQ9NX95 663 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 PAGE1O75459 146 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 HNRNPCP07910 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 TPSB2P20231 275 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 NTSP30990 170 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 IFNGR2P38484 337 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 GABRB2P47870 512 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 TPSAB1Q15661 275 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 TCHHL1Q5QJ38 904 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-206ENST00000579662 MON1BQ7L1V2 547 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 SVOPQ8N4V2 548 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 SELENOMQ8WWX9 145 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 APOL4Q9BPW4 351 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 LIMD1Q9UGP4 676 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 GGA2Q9UJY4 613 aa15.34■□□□□ 0.05
ITGB4-206ENST00000579662 SLC28A1O00337 649 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 DDX3YO15523 660 aaKnown RBP15.33■□□□□ 0.05
ITGB4-206ENST00000579662 PIK3R1P27986 724 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 JAM2P57087 298 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 UBE3AQ05086 875 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 PTP4A2Q12974 167 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 CDRT15Q96T59 188 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 HIPK3Q9H422 1215 aa15.33■□□□□ 0.05
ITGB4-206ENST00000579662 REXO2Q9Y3B8 237 aaKnown RBP15.33■□□□□ 0.05
ITGB4-206ENST00000579662 CNPP09543 421 aaKnown RBP15.33■□□□□ 0.04
ITGB4-206ENST00000579662 MAPK9P45984 424 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 PWP1Q13610 501 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 PIK3R5Q8WYR1 880 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 MAML3Q96JK9 1138 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 FGFBP2Q9BYJ0 223 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 PIF1Q9H611 641 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 KLQ9UEF7 1012 aa15.33■□□□□ 0.04
ITGB4-206ENST00000579662 MRPL42Q9Y6G3 142 aaKnown RBP15.33■□□□□ 0.04
ITGB4-206ENST00000579662 A8MX80 341 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms