RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 KLK6Q92876 244 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 LRIG1Q96JA1 1093 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 KLHL32Q96NJ5 620 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 CINPQ9BW66 212 aaPredicted RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 OSBPL1AQ9BXW6 950 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 HDAC8Q9BY41 377 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 SLC39A8Q9C0K1 460 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 GAREM1Q9H706 876 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 CAPN10Q9HC96 672 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 PREBQ9HCU5 417 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 IPO11Q9UI26 975 aaKnown RBP6.66□□□□□ -1.34
TRAF4-213ENST00000578917 ANKRD6Q9Y2G4 727 aa6.66□□□□□ -1.34
TRAF4-213ENST00000578917 A0A1W2PQU0 124 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 C16orf96A6NNT2 1141 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PRAMEF26H0Y7S4 382 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 CDX4O14627 284 aaPredicted RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 KCNK3O14649 394 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PLRG1O43660 514 aaKnown RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SPOPO43791 374 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 MAGEC1O60732 1142 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PRAMEF11O60813 436 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ADRB3P13945 408 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 TCF4P15884 667 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PRLRP16471 622 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ITGB7P26010 798 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 CD38P28907 300 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 AKT2P31751 481 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SERPINB6P35237 376 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ARHGAP25P42331 645 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SCNN1BP51168 640 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 NOVA1P51513 510 aaKnown RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 RENBPP51606 427 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 RPS21P63220 83 aaKnown RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ITKQ08881 620 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 GRIK2Q13002 908 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SLC14A1Q13336 389 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF235Q14590 738 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 GRM3Q14832 879 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PDK2Q15119 407 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 CYTH1Q15438 398 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 DPYSL2Q16555 572 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 KIF19Q2TAC6 998 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ASTE1Q2TB18 679 aaPredicted RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ATP13A4Q4VNC1 1196 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ZNF805Q5CZA5 627 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PRAMEF14Q5SWL7 426 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ARTNQ5T4W7 220 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 AGBL4Q5VU57 503 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PEAR1Q5VY43 1037 aaPredicted RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PSAPL1Q6NUJ1 521 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 NEK5Q6P3R8 708 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 LAYNQ6UX15 382 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 POLNQ7Z5Q5 900 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 TMTC1Q8IUR5 882 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 CCDC170Q8IYT3 715 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ATPAF2Q8N5M1 289 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SPC24Q8NBT2 197 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 CCNYQ8ND76 341 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 RAB7BQ96AH8 199 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 ARRDC3Q96B67 414 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 MRFAP1L1Q96HT8 127 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 EXOC2Q96KP1 924 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SLC6A18Q96N87 628 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 CSPG4P5Q96PW8 444 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PANX2Q96RD6 677 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 MYOCQ99972 504 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 KLC2Q9H0B6 622 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 NOL6Q9H6R4 1146 aaKnown RBP6.65□□□□□ -1.34
TRAF4-213ENST00000578917 LRRC19Q9H756 370 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 PCDH18Q9HCL0 1135 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 HAUS2Q9NVX0 235 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SEPT3Q9UH03 358 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 DMTF1Q9Y222 760 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 SNX11Q9Y5W9 270 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 WASF2Q9Y6W5 498 aa6.65□□□□□ -1.34
TRAF4-213ENST00000578917 KNL1Q8NG31 2342 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 LRRD1A4D1F6 860 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 IGLON5A6NGN9 336 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TLR4O00206 839 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 VILLO15195 856 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 TSPAN6O43657 245 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 DFNA5O60443 496 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF821O75541 412 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 KCNK5O95279 499 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 CD160O95971 181 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 PAK4O96013 591 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 C7P10643 843 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 CEACAM1P13688 526 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SERPINA4P29622 427 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 MAN1A1P33908 653 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SLC1A1P43005 524 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 GRIA4P48058 902 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 ARRB1P49407 418 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 PPP2CBP62714 309 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 POLR2LP62875 67 aaKnown RBP6.64□□□□□ -1.35
TRAF4-213ENST00000578917 PPP2CAP67775 309 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 FAM193AP78312 1265 aa6.64□□□□□ -1.35
TRAF4-213ENST00000578917 SIM1P81133 766 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms