RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 STRADAQ7RTN6 431 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC9B2Q86UD5 537 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ANKMY2Q8IV38 441 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 RAVER1Q8IY67 606 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 RASGEF1AQ8N9B8 481 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SIDT2Q8NBJ9 832 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 OR10Q1Q8NGQ4 319 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 AGR3Q8TD06 166 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 BRSK1Q8TDC3 778 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MYLIPQ8WY64 445 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM136AQ96C01 138 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MTMR8Q96EF0 704 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SGF29Q96ES7 293 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MYO19Q96H55 970 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 IGSF21Q96ID5 467 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 C5orf34Q96MH7 638 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ACOX2Q99424 681 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GOLPH3LQ9H4A5 285 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 RERGLQ9H628 205 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 BCAS3Q9H6U6 928 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PPCSQ9HAB8 311 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PDE7BQ9NP56 450 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 AGPAT5Q9NUQ2 364 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 UBP1Q9NZI7 540 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SCHIP1Q9P0W5 487 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GRID1Q9ULK0 1009 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 INVSQ9Y283 1065 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 N6AMT1Q9Y5N5 214 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SNX5Q9Y5X3 404 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1W2PQH9 124 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 HACD1B0YJ81 288 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 XPO1O14980 1071 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NPC1O15118 1278 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PSTPIP1O43586 416 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHL18O94889 574 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ADH1BP00325 375 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ERCC1P07992 297 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SNRPAP09012 282 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC35G6P0C7Q6 338 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP1A3P13637 1013 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 LPOP22079 712 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TKTP29401 623 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PBX3P40426 434 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 HNF4AP41235 474 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CPA2P48052 419 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NR2C2P49116 596 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TTPAP49638 278 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCNKBP51801 687 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 HNRNPKP61978 463 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MC1RQ01726 317 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MCL1Q07820 350 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 STX5Q13190 355 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PDE1CQ14123 709 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 POU6F1Q14863 301 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GRAMD1BQ3KR37 738 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MBLAC2Q68D91 279 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 DUS1LQ6P1R4 473 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SARM1Q6SZW1 724 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 EPM2AIP1Q7L775 607 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TAS1R3Q7RTX0 852 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GALNT7Q86SF2 657 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CAND1Q86VP6 1230 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MMAAQ8IVH4 418 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ARHGEF19Q8IW93 802 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM20CQ8IXL6 584 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 PPIL6Q8IXY8 311 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 AHI1Q8N157 1196 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 Q8N9G6 341 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SNIP1Q8TAD8 396 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 HDAC7Q8WUI4 952 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ASZ1Q8WWH4 475 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TUBGCP3Q96CW5 907 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 RBM18Q96H35 190 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF514Q96K75 400 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM83CQ9BQN1 747 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SPATA9Q9BWV2 254 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GPR174Q9BXC1 333 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 IRX2Q9BZI1 471 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 EBF3Q9H4W6 596 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 WDR26Q9H7D7 661 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 POLR1BQ9H9Y6 1135 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 VPS45Q9NRW7 570 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 KRT84Q9NSB2 600 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 IARS2Q9NSE4 1012 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NCKIPSDQ9NZQ3 722 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 HCN2Q9UL51 889 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CHMP2BQ9UQN3 213 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TBC1D30Q9Y2I9 924 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ACOT9Q9Y305 439 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 INSL5Q9Y5Q6 135 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF780BQ9Y6R6 833 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A0G2JND7 137 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ANO9A1A5B4 782 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ERI2A8K979 691 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 A8MU76 341 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 E5RJQ4 531 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 H0YGN5 161 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 FOXN3O00409 490 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms