RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-203ENST00000577442 HSPA12BQ96MM6 686 aa12.91□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CD93Q9NPY3 652 aa12.91□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FRYLO94915 3013 aa12.91□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TRPM6Q9BX84 2022 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CNOT1A5YKK6 2376 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KRIT1O00522 736 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FOXD2O60548 495 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 LEFTY1O75610 366 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CTSLP07711 333 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ITGB7P26010 798 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GARSP41250 739 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CDKN2BP42772 138 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CSNK1DP48730 415 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MARCKSL1P49006 195 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RWDD2BP57060 319 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CREB5Q02930 508 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ZNF33AQ06730 810 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 LBRQ14739 615 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PDK1Q15118 436 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CYTH1Q15438 398 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TAZQ16635 292 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ATXN7L2Q5T6C5 722 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ARMCX6Q7L4S7 300 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TP53INP2Q8IXH6 220 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 AADATQ8N5Z0 425 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 NETO2Q8NC67 525 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 OR2T34Q8NGX1 318 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KRT35Q92764 455 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FATE1Q969F0 183 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FAM131CQ96AQ9 280 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ZNF419Q96HQ0 510 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PDLIM2Q96JY6 352 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ALS2CR12Q96Q35 445 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PSKH2Q96QS6 385 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 HDAC8Q9BY41 377 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KDM4CQ9H3R0 1056 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 DTLQ9NZJ0 730 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 LHX3Q9UBR4 397 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SUSD2Q9UGT4 822 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SARDHQ9UL12 918 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PCDHA3Q9Y5H8 950 aa12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TNRC6BQ9UPQ9 1833 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CABIN1Q9Y6J0 2220 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 BCLAF3A2AJT9 711 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MAFKO60675 156 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NEBLO76041 1014 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TGM2P21980 687 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ACSL1P33121 698 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 DRD3P35462 400 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MPLP40238 635 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NR2C2P49116 596 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NEK3P51956 506 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ADPRHP54922 357 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 AP1S1P61966 158 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 GBE1Q04446 702 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NSUN2Q08J23 767 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 POM121L1PQ3SYA9 428 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 AGBL4Q5VU57 503 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ERN2Q76MJ5 926 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NT5DC3Q86UY8 548 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SYT12Q8IV01 421 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 OR6K2Q8NGY2 324 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 OR14C36Q8NHC7 312 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TSGA13Q96PP4 275 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 TUBGCP5Q96RT8 1024 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CPEB1Q9BZB8 566 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ARRDC1-AS1Q9H2J1 176 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 SERGEFQ9UGK8 458 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PPP2R2CQ9Y2T4 447 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 HEY1Q9Y5J3 304 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 ANKRD36A6QL64 1941 aa12.89□□□□□ -0.35
CDK5RAP3-203ENST00000577442 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 A0A0U1RQJ8 604 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 MATN3O15232 486 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 PLRG1O43660 514 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 CST8O60676 142 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 UGT2B4P06133 528 aa12.88□□□□□ -0.35
CDK5RAP3-203ENST00000577442 GNSP15586 552 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms