RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 GJB3O75712 270 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 PAPSS2O95340 614 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 IGSF6O95976 241 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 GSRP00390 522 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 HLA-DQB2P05538 268 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CTSLP07711 333 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 GABRG2P18507 467 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 NDUFV2P19404 249 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 PTPN3P26045 913 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CHRNA3P32297 505 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 RECQLP46063 649 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 PXNP49023 591 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 RENBPP51606 427 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 NRLP54845 237 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 RPS14P62263 151 aaKnown RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 SNRPD1P62314 119 aaKnown RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 IFI35P80217 286 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 ITKQ08881 620 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 WASHC5Q12768 1159 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 SNX1Q13596 522 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 ZNF235Q14590 738 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CCNG2Q16589 344 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 MYLK3Q32MK0 819 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 ARSIQ5FYB1 569 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 HEATR6Q6AI08 1181 aaKnown RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 ANO7Q6IWH7 933 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 ASCL5Q7RTU5 278 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 TMPRSS6Q8IU80 811 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CREG2Q8IUH2 290 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 MMAAQ8IVH4 418 aaKnown RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 CDKL3Q8IVW4 592 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 PLPP6Q8IY26 295 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 MAML2Q8IZL2 1156 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 BBS5Q8N3I7 341 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CAMKK1Q8N5S9 505 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CNTD1Q8N815 330 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 PRELID2Q8N945 189 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 TSTD1Q8NFU3 115 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 OR6K2Q8NGY2 324 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 HTR3CQ8WXA8 447 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CAPZA3Q96KX2 299 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 MRGPRX1Q96LB2 322 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 CCDC114Q96M63 670 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 NSMCE3Q96MG7 304 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 GDAP1L1Q96MZ0 367 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 MGME1Q9BQP7 344 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 HEPHQ9BQS7 1158 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 AP1M1Q9BXS5 423 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 FRMD8P1Q9BZ68 369 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 MKRN2Q9H000 416 aaKnown RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 RSPH9Q9H1X1 276 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 USP29Q9HBJ7 922 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 PRMT8Q9NR22 394 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 ATP8A1Q9Y2Q0 1164 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 FARP1Q9Y4F1 1045 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 KMT2BQ9UMN6 2715 aaPredicted RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 MYO18AQ92614 2054 aaKnown RBP8.69□□□□□ -1.02
NUP88-211ENST00000575976 ZFHX4Q86UP3 3567 aa8.69□□□□□ -1.02
NUP88-211ENST00000575976 PDE2AO00408 941 aaPredicted RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 KRIT1O00522 736 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ALOX15BO15296 676 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 KCNN4O15554 427 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 MTSS1O43312 755 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 NEBLO76041 1014 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ALDH1A2O94788 518 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 APBB3O95704 486 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 POP4O95707 220 aaKnown RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 IL1BP01584 269 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 TUBB4AP04350 444 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 TDGF1P13385 188 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 CR2P20023 1033 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 HSPA9P38646 679 aaKnown RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 KCNJ1P48048 391 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 PSMD8P48556 350 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 CSNK1DP48730 415 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 SCNN1BP51168 640 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 DSC2Q02487 901 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 CSTF1Q05048 431 aaKnown RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 NSUN2Q08J23 767 aaKnown RBP eCLIP8.68□□□□□ -1.02
NUP88-211ENST00000575976 DMWDQ09019 674 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 NIPAL4Q0D2K0 466 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ELAVL3Q14576 367 aaKnown RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 OASLQ15646 514 aaKnown RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 TEX44Q53QW1 395 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ZNF776Q68DI1 518 aaPredicted RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 NCEH1Q6PIU2 408 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 KIAA1324Q6UXG2 1013 aaKnown RBP8.68□□□□□ -1.02
NUP88-211ENST00000575976 PID1Q7Z2X4 250 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 SRLQ86TD4 932 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 RASSF3Q86WH2 238 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 CACUL1Q86Y37 369 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ZNF567Q8N184 647 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 PGBD3Q8N328 593 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.68□□□□□ -1.02
NUP88-211ENST00000575976 MDGA1Q8NFP4 955 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 ARRDC2Q8TBH0 407 aa8.68□□□□□ -1.02
NUP88-211ENST00000575976 PIP4K2CQ8TBX8 421 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms