RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 KRIT1O00522 736 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 MUSKO15146 869 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 ZNF217O75362 1048 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 JCHAINP01591 159 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 SP9P0CG40 484 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 PRLRP16471 622 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 CASQ1P31415 396 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 MAPK8P45983 427 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 CSNK1DP48730 415 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 FNTBP49356 437 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 ITKQ08881 620 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 DMWDQ09019 674 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 SFSWAPQ12872 951 aaKnown RBP14.18□□□□□ -0.14
RPAIN-217ENST00000575711 GRM3Q14832 879 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 ARSIQ5FYB1 569 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 PAPD7Q5XG87 772 aaKnown RBP14.18□□□□□ -0.14
RPAIN-217ENST00000575711 DARS2Q6PI48 645 aaKnown RBP14.18□□□□□ -0.14
RPAIN-217ENST00000575711 WDR5BQ86VZ2 330 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 RASGEF1CQ8N431 466 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 TMIEQ8NEW7 156 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 PIP4K2CQ8TBX8 421 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 COG1Q8WTW3 980 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 HTR3CQ8WXA8 447 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 LRIG1Q96JA1 1093 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 OSBPL1AQ9BXW6 950 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 TPSD1Q9BZJ3 242 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 POLR1EQ9GZS1 481 aaKnown RBP14.18□□□□□ -0.14
RPAIN-217ENST00000575711 ZDHHC6Q9H6R6 413 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 PPM1HQ9ULR3 514 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 TTC7AQ9ULT0 858 aaPredicted RBP14.18□□□□□ -0.14
RPAIN-217ENST00000575711 R3HDM2Q9Y2K5 976 aaKnown RBP14.18□□□□□ -0.14
RPAIN-217ENST00000575711 TTLL3Q9Y4R7 772 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 SAR1BQ9Y6B6 198 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 CKAP5Q14008 2032 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 PGRMC1O00264 195 aaKnown RBP14.17□□□□□ -0.14
RPAIN-217ENST00000575711 KPNA3O00505 521 aaPredicted RBP14.17□□□□□ -0.14
RPAIN-217ENST00000575711 MID1O15344 667 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 LEFTY1O75610 366 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 HLA-DQB2P05538 268 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 CTSLP07711 333 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 C7P10643 843 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 C5AR1P21730 350 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 RBL1P28749 1068 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 SLC8A1P32418 973 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 RGRP47804 291 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 SCNN1BP51168 640 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 MAXP61244 160 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 AP1S1P61966 158 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 ZBTB17Q13105 803 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
RPAIN-217ENST00000575711 RALGPS1Q5JS13 557 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 SYT10Q6XYQ8 523 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 NYAP1Q6ZVC0 841 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 SRLQ86TD4 932 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 ZNF419Q96HQ0 510 aaPredicted RBP14.17□□□□□ -0.14
RPAIN-217ENST00000575711 PPP1R16AQ96I34 528 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 MS4A14Q96JA4 679 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 C16orf45Q96MC5 204 aaPredicted RBP14.17□□□□□ -0.14
RPAIN-217ENST00000575711 NUDCD1Q96RS6 583 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 VAT1Q99536 393 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 IL12RB2Q99665 862 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 CEP41Q9BYV8 373 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 PABPC3Q9H361 631 aaKnown RBP14.17□□□□□ -0.14
RPAIN-217ENST00000575711 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 DYRK4Q9NR20 520 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 ZSCAN32Q9NX65 697 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 SARDHQ9UL12 918 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 NCKAP1Q9Y2A7 1128 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 WASF2Q9Y6W5 498 aa14.17□□□□□ -0.14
RPAIN-217ENST00000575711 BCLAF3A2AJT9 711 aaKnown RBP14.16□□□□□ -0.14
RPAIN-217ENST00000575711 ZNF185O15231 689 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 INSIG1O15503 277 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 KCNN4O15554 427 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 LIASO43766 372 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 STK10O94804 968 aaKnown RBP14.16□□□□□ -0.14
RPAIN-217ENST00000575711 CR2P20023 1033 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 CES1P23141 567 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 PTPN3P26045 913 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 GKP32189 559 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 USP39Q53GS9 565 aaKnown RBP14.16□□□□□ -0.14
RPAIN-217ENST00000575711 TEX44Q53QW1 395 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 HDDC3Q8N4P3 179 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 SLC35B2Q8TB61 432 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 ACTRT1Q8TDG2 376 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 GANCQ8TET4 914 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 C1orf54Q8WWF1 131 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 ATG4AQ8WYN0 398 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 NELL1Q92832 810 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 SPACA7Q96KW9 195 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 AGAP3Q96P47 875 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 TUBGCP5Q96RT8 1024 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 SEMA3CQ99985 751 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 CPEB1Q9BZB8 566 aaKnown RBP14.16□□□□□ -0.14
RPAIN-217ENST00000575711 KCNH6Q9H252 994 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 ATP13A3Q9H7F0 1226 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 C10orf88Q9H8K7 445 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 ITM2CQ9NQX7 267 aa14.16□□□□□ -0.14
RPAIN-217ENST00000575711 HOMER3Q9NSC5 361 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms