RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LIPCP11150 499 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 KRT10P13645 584 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 ITGB6P18564 788 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 CD82P27701 267 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 NOS2P35228 1153 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 NME3Q13232 169 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 PDCLQ13371 301 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 FGL2Q14314 439 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 ELOCQ15369 112 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 TAF5Q15542 800 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 CARD16Q5EG05 197 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 BRMS1LQ5PSV4 323 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 MANEAQ5SRI9 462 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 PERM1Q5SV97 790 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 C22orf39Q6P5X5 142 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 PLPP6Q8IY26 295 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 DEFB106AQ8N104 65 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 PCDH20Q8N6Y1 951 aaKnown RBP9.17□□□□□ -0.94
SMG6-218ENST00000575454 EHBP1Q8NDI1 1231 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 OR52K2Q8NGK3 314 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 EXTL1Q92935 676 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 KAT5Q92993 513 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 SCAND2PQ9GZW5 306 aaPredicted RBP9.17□□□□□ -0.94
SMG6-218ENST00000575454 TNKS2Q9H2K2 1166 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 WDCPQ9H6R7 721 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 SYNDIG1Q9H7V2 258 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 EPB41L5Q9HCM4 733 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
SMG6-218ENST00000575454 KLF15Q9UIH9 416 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
SMG6-218ENST00000575454 ILVBLA1L0T0 632 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 IGLON5A6NGN9 336 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 DRGXA6NNA5 263 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 TMEM110-MUSTN1A8MSY1 372 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 PSMA7O14818 248 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 RAD51BO15315 384 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 SPINT1O43278 529 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 THAP12O43422 761 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 NOBOXO60393 691 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 GCATO75600 419 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 ADCY5O95622 1261 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 F9P00740 461 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 FAM87AP0C7U9 286 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 GNA15P30679 374 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 OR1E1P30953 314 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 CCKBRP32239 447 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 PPP1R2P41236 205 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 SERPINH1P50454 418 aaKnown RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 DNA2P51530 1060 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 PDX1P52945 283 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 PITX1P78337 314 aaPredicted RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 PPARDQ03181 441 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 EIF2B5Q13144 721 aaKnown RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 CCDC40Q4G0X9 1142 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 FAXCQ5TGI0 409 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 TMEM164Q5U3C3 297 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 C11orf57Q6ZUT1 292 aaPredicted RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 HSCBQ8IWL3 235 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 PHACTR4Q8IZ21 702 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 LMO3Q8TAP4 145 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 ZNF606Q8WXB4 792 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 DHTKD1Q96HY7 919 aaPredicted RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 PPP1R13BQ96KQ4 1090 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 C1orf74Q96LT6 269 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 PSMB7Q99436 277 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 KLF6Q99612 283 aaPredicted RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 LRRC61Q9BV99 259 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 B3GNT4Q9C0J1 378 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 SLC25A18Q9H1K4 315 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 GULP1Q9UBP9 304 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 HOOK1Q9UJC3 728 aaKnown RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 ATP6V1DQ9Y5K8 247 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 TLN1Q9Y490 2541 aaKnown RBP9.16□□□□□ -0.94
SMG6-218ENST00000575454 DOPEY2Q9Y3R5 2298 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 ABCA12Q86UK0 2595 aa9.16□□□□□ -0.94
SMG6-218ENST00000575454 USP9YO00507 2555 aaPredicted RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 A0A0D9SEW6 157 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 A0A1W2PQC6 194 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 PMS2P1A4D2B8 440 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 C16orf96A6NNT2 1141 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 D6RAR5 112 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 CNTN5O94779 1100 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ENDOD1O94919 500 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 GNA14O95837 355 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 CALCAP01258 141 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 TSHRP16473 764 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ETFBP38117 255 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 PEX5P50542 639 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 IRAK1P51617 712 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 CCNHP51946 323 aaPredicted RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 GEMIN4P57678 1058 aaKnown RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 C1orf61Q13536 156 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 MORC3Q14149 939 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 DRAP1Q14919 205 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms