RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 PIGNO95427 931 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 COX4I1P13073 169 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SPRP35270 261 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 ADRA1BP35368 520 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CCR3P51677 355 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 FAM91A1Q658Y4 838 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 OVOS1Q6IE37 1185 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 LRRC8BQ6P9F7 803 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SNX32Q86XE0 403 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CDC26Q8NHZ8 85 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 ACTRT2Q8TDY3 377 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SLC45A3Q96JT2 553 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 VPS33BQ9H267 617 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 VTA1Q9NP79 307 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 FETUBQ9UGM5 382 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SLC2A6Q9UGQ3 507 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 NME7Q9Y5B8 376 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 DNAH14Q0VDD8 3507 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 RRN3P2A6NIE6 340 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 GABBR2O75899 941 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 PRKCHP24723 683 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 PPM1FP49593 454 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SGO1Q5FBB7 561 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 PITRM1Q5JRX3 1037 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 NCBP2-AS2Q69YL0 99 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 ESRP1Q6NXG1 681 aaKnown RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 PQLC1Q8N2U9 271 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 BHLHE22Q8NFJ8 381 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CERS2Q96G23 380 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 ARHGAP39Q9C0H5 1083 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 NMRK2Q9NPI5 230 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SNX15Q9NRS6 342 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 TRMT13Q9NUP7 481 aaKnown RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 AURKCQ9UQB9 309 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 FAM189A1O60320 539 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 PLIN3O60664 434 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 RNASEH2AO75792 299 aaKnown RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CLIC3O95833 236 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 C2P06681 752 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CRHR1P34998 444 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 ADARP55265 1226 aaKnown RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 YBX1P67809 324 aaKnown RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 WASHC5Q12768 1159 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 OGFRL1Q5TC84 451 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 MYO1HQ8N1T3 1032 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 TDRD5Q8NAT2 981 aaKnown RBP8.64□□□□□ -1.03
RPAIN-215ENST00000575112 OR52K2Q8NGK3 314 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 ATP6V1E2Q96A05 226 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 RCN3Q96D15 328 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 OLFM3Q96PB7 478 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 NPAS2Q99743 824 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 C1orf21Q9H246 121 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 CCDC167Q9P0B6 97 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 GJD2Q9UKL4 321 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 DSEQ9UL01 958 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 FAM50BQ9Y247 325 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 SSX2IPQ9Y2D8 614 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 RNF11Q9Y3C5 154 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 MCM3APO60318 1980 aa8.64□□□□□ -1.03
RPAIN-215ENST00000575112 AXIN1O15169 862 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 CHADO15335 359 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 EDNRBP24530 442 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 MTTPP55157 894 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 MCCD1P59942 119 aaPredicted RBP8.63□□□□□ -1.03
RPAIN-215ENST00000575112 IL1RL1Q01638 556 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 FUT11Q495W5 492 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 TIGD5Q53EQ6 642 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 ITPRIPL1Q6GPH6 555 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 B3GNT6Q6ZMB0 384 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 ARHGAP18Q8N392 663 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 OR6K2Q8NGY2 324 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 SNX27Q96L92 541 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 TRIM8Q9BZR9 551 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 FLRT1Q9NZU1 646 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 POLR2AP24928 1970 aaKnown RBP8.63□□□□□ -1.03
RPAIN-215ENST00000575112 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 ITGB1P05556 798 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 RPL17P18621 184 aaKnown RBP8.63□□□□□ -1.03
RPAIN-215ENST00000575112 UGT1A6P19224 532 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 CCR1P32246 355 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 NOS2P35228 1153 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 ENTPD1P49961 510 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 KLF10Q13118 480 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 GRM3Q14832 879 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 TAZQ16635 292 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 MARCH8Q5T0T0 291 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 CLEC20AQ6ZU45 233 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 DEFB128Q7Z7B8 93 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 SLC29A1Q99808 456 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 ARMC7Q9H6L4 198 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 BPIFA1Q9NP55 256 aa8.63□□□□□ -1.03
RPAIN-215ENST00000575112 FAM105AQ9NUU6 356 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms