RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 C11orf74Q86VG3 221 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 LRRN4Q8WUT4 740 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 HAUS1Q96CS2 278 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 INVSQ9Y283 1065 aa33.59■■■□□ 2.97
CTDNEP1-209ENST00000574205 IGHV1OR15-9A0A0B4J2B8 117 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 KRIT1O00522 736 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 KCNK3O14649 394 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 CSNK1DP48730 415 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 AP1B1Q10567 949 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 FAM160A2Q8N612 972 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 FAM86C1Q9NVL1 165 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 FBXL12Q9NXK8 326 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 EVLQ9UI08 416 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 SPAG17Q6Q759 2223 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 CCNB1P14635 433 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 OXTRP30559 389 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 NBL1P41271 181 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 FRMD1Q8N878 549 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 OMDQ99983 421 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 AMACRQ9UHK6 382 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 NCKAP1Q9Y2A7 1128 aa33.58■■■□□ 2.97
CTDNEP1-209ENST00000574205 VPS13AQ96RL7 3174 aa33.57■■■□□ 2.97
CTDNEP1-209ENST00000574205 A0A1W2PP55 124 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 KPNA3O00505 521 aaPredicted RBP33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 MUSKO15146 869 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 GKP32189 559 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 RGRP47804 291 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 NOMO1Q15155 1222 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 SLC35F6Q8N357 371 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 AADATQ8N5Z0 425 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 TFB1MQ8WVM0 346 aaKnown RBP33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 ZNF419Q96HQ0 510 aaPredicted RBP33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 PPP1R16AQ96I34 528 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 MGME1Q9BQP7 344 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 OSBPL1AQ9BXW6 950 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 CPEB1Q9BZB8 566 aaKnown RBP33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 KCND1Q9NSA2 647 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 HAUS2Q9NVX0 235 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 MYO15AQ9UKN7 3530 aa33.57■■■□□ 2.96
CTDNEP1-209ENST00000574205 CD6P30203 668 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 DRD3P35462 400 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 METAP1P53582 386 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 KLF1Q13351 362 aaPredicted RBP33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 SIM2Q14190 667 aaPredicted RBP33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 GRM3Q14832 879 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 SLC36A4Q6YBV0 504 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 CEP68Q76N32 757 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 ZC3H18Q86VM9 953 aaKnown RBP33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 HDDC3Q8N4P3 179 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 ACTL9Q8TC94 416 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 GANCQ8TET4 914 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 VOPP1Q96AW1 172 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 EPC1Q9H2F5 836 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 WSB2Q9NYS7 404 aaPredicted RBP33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 SERGEFQ9UGK8 458 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 FZD4Q9ULV1 537 aa33.56■■■□□ 2.96
CTDNEP1-209ENST00000574205 KCNK1O00180 336 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 ENC1O14682 589 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 RNASEH2AO75792 299 aaKnown RBP33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 IFI35P80217 286 aaPredicted RBP33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 OTUD4Q01804 1114 aaKnown RBP33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 XRCC4Q13426 336 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 PRKD1Q15139 912 aaPredicted RBP33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 POM121L1PQ3SYA9 428 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 PGBD5Q8N414 524 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 TTC13Q8NBP0 860 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 SEMA4AQ9H3S1 761 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 DYRK4Q9NR20 520 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 RBM22Q9NW64 420 aaKnown RBP eCLIP33.55■■■□□ 2.962e-6■□□□□ 11.1
CTDNEP1-209ENST00000574205 MBD1Q9UIS9 605 aaPredicted RBP33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 ABCA7Q8IZY2 2146 aa33.55■■■□□ 2.96
CTDNEP1-209ENST00000574205 HACD1B0YJ81 288 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 NEBLO76041 1014 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 DMDP11532 3685 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 BCKDHBP21953 392 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 MAPK8P45983 427 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 SRLQ86TD4 932 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 TOE1Q96GM8 510 aaKnown RBP33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 TUBGCP5Q96RT8 1024 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 BTBD1Q9H0C5 482 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 NT5MQ9NPB1 228 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 NUMA1Q14980 2115 aa33.54■■■□□ 2.96
CTDNEP1-209ENST00000574205 RNF103O00237 685 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 CR2P20023 1033 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 SCNN1BP51168 640 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 FAM124AQ86V42 546 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 FAM131CQ96AQ9 280 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 POLR1EQ9GZS1 481 aaKnown RBP33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 NEUROG2Q9H2A3 272 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 USP34Q70CQ2 3546 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 INSIG1O15503 277 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 MAP3K13O43283 966 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 UGT2B4P06133 528 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 ITGB7P26010 798 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 MAXP61244 160 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 AP1S1P61966 158 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 NHLH1Q02575 133 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 CCDC15Q0P6D6 951 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 RALGPS1Q5JS13 557 aa33.53■■■□□ 2.96
CTDNEP1-209ENST00000574205 GDPD4Q6W3E5 623 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms