RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PPP1R16AQ96I34 528 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 GDAP1L1Q96MZ0 367 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 OMDQ99983 421 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 BTBD1Q9H0C5 482 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.61
CHD3-216ENST00000573936 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 GOLPH3Q9H4A6 298 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 SGK2Q9HBY8 427 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 DYRK4Q9NR20 520 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 FBXL12Q9NXK8 326 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 WSB2Q9NYS7 404 aaPredicted RBP11.21□□□□□ -0.61
CHD3-216ENST00000573936 HECAQ9UBI9 543 aaPredicted RBP11.21□□□□□ -0.61
CHD3-216ENST00000573936 TRIM10Q9UDY6 481 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 PPM1HQ9ULR3 514 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 INVSQ9Y283 1065 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 ACTL7AQ9Y615 435 aa11.21□□□□□ -0.61
CHD3-216ENST00000573936 ASPMQ8IZT6 3477 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 EML5Q05BV3 1969 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 MFSD11O43934 449 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 MAFKO60675 156 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 ZNF821O75541 412 aaPredicted RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 CCNCP24863 283 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 HSPA9P38646 679 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 GARSP41250 739 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 DPP6P42658 865 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 CDKN2BP42772 138 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 CSNK1DP48730 415 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 NR2C2P49116 596 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 CCNHP51946 323 aaPredicted RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 NSUN2Q08J23 767 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHD3-216ENST00000573936 GALNT2Q10471 571 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 SF3A2Q15428 464 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 CYTH1Q15438 398 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 PPP2R5EQ16537 467 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 TAZQ16635 292 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 MYLK3Q32MK0 819 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 ARSIQ5FYB1 569 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 N4BP2L1Q5TBK1 243 aaPredicted RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 PMS2CLQ68D20 193 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 SPOCD1Q6ZMY3 1216 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 DPY19L3Q6ZPD9 716 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 CCDC50Q8IVM0 306 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 RYBPQ8N488 228 aaPredicted RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 HDDC3Q8N4P3 179 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 CADM4Q8NFZ8 388 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 FATE1Q969F0 183 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 TOE1Q96GM8 510 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 TSGA13Q96PP4 275 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 ALS2CR12Q96Q35 445 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 OSBPL1AQ9BXW6 950 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 TM6SF2Q9BZW4 377 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 PCED1AQ9H1Q7 454 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 ARRDC1-AS1Q9H2J1 176 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 SEPT3Q9UH03 358 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 FZD4Q9ULV1 537 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 EFR3BQ9Y2G0 817 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 MFHAS1Q9Y4C4 1052 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 PCDHGA5Q9Y5G8 931 aa11.2□□□□□ -0.62
CHD3-216ENST00000573936 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
CHD3-216ENST00000573936 CKAP5Q14008 2032 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 A0A0U1RQJ8 604 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 A0A1W2PP55 124 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 PPP1R12AO14974 1030 aaPredicted RBP11.19□□□□□ -0.62
CHD3-216ENST00000573936 MATN3O15232 486 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 SLC7A4O43246 635 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 LEFTY1O75610 366 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 RNASEH2AO75792 299 aaKnown RBP11.19□□□□□ -0.62
CHD3-216ENST00000573936 NEBLO76041 1014 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 BCKDHBP21953 392 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 TGM2P21980 687 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 PEX5P50542 639 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 LIMK1P53667 647 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 ZNF33AQ06730 810 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 HNRNPDQ14103 355 aaKnown RBP11.19□□□□□ -0.62
CHD3-216ENST00000573936 PDK1Q15118 436 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 HS1BP3Q53T59 392 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 SYCP2LQ5T4T6 812 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 MARC1Q5VT66 337 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 KAZNQ674X7 775 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 ARHGAP36Q6ZRI8 547 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 CACUL1Q86Y37 369 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 TP53INP2Q8IXH6 220 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 PLD5Q8N7P1 536 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 NETO2Q8NC67 525 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 CHST14Q8NCH0 376 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 CCNYQ8ND76 341 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 KRT35Q92764 455 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 HDAC11Q96DB2 347 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 CPEB1Q9BZB8 566 aaKnown RBP11.19□□□□□ -0.62
CHD3-216ENST00000573936 NEUROG2Q9H2A3 272 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms