RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 C11orf74Q86VG3 221 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 CCDC13Q8IYE1 715 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 PGBD5Q8N414 524 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 SUMF1Q8NBK3 374 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 LRRN4Q8WUT4 740 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 LRIG1Q96JA1 1093 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 NSMCE3Q96MG7 304 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 LGMNQ99538 433 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 MGME1Q9BQP7 344 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 CINPQ9BW66 212 aaPredicted RBP13.35□□□□□ -0.27
TRAP1-208ENST00000573872 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
TRAP1-208ENST00000573872 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
TRAP1-208ENST00000573872 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 TRMT1Q9NXH9 659 aaKnown RBP13.35□□□□□ -0.27
TRAP1-208ENST00000573872 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAP1-208ENST00000573872 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
TRAP1-208ENST00000573872 A0A1W2PP55 124 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 INSIG1O15503 277 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 CD6P30203 668 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 OXTRP30559 389 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 HSPA9P38646 679 aaKnown RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 RENBPP51606 427 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 IFI35P80217 286 aaPredicted RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 SIM2Q14190 667 aaPredicted RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 PRKD1Q15139 912 aaPredicted RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 NOMO1Q15155 1222 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 RPS6KA1Q15418 735 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 MARC1Q5VT66 337 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 PMS2CLQ68D20 193 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 ALG1LQ6GMV1 187 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 P3H4Q92791 437 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 ARRDC3Q96B67 414 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 TOE1Q96GM8 510 aaKnown RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 BRD8Q9H0E9 1235 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 CARD9Q9H257 536 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 ZDHHC6Q9H6R6 413 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 KCND1Q9NSA2 647 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 EVLQ9UI08 416 aaPredicted RBP13.34□□□□□ -0.27
TRAP1-208ENST00000573872 FZD4Q9ULV1 537 aa13.34□□□□□ -0.27
TRAP1-208ENST00000573872 PLK4O00444 970 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 PPP1R12AO14974 1030 aaPredicted RBP13.33□□□□□ -0.28
TRAP1-208ENST00000573872 GJB3O75712 270 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 TJP3O95049 919 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 CCNB1P14635 433 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 ITGB7P26010 798 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 ACSL1P33121 698 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 CETN2P41208 172 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 MMP13P45452 471 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 CNTN1Q12860 1018 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 SFSWAPQ12872 951 aaKnown RBP13.33□□□□□ -0.28
TRAP1-208ENST00000573872 ZBTB17Q13105 803 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 ZNF235Q14590 738 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 SPDYCQ5MJ68 293 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 AGBL4Q5VU57 503 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 SLC36A4Q6YBV0 504 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 SRLQ86TD4 932 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 HDDC3Q8N4P3 179 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 CCNYQ8ND76 341 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 NSMCE1Q8WV22 266 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 OSBPL1AQ9BXW6 950 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 AMACRQ9UHK6 382 aa13.33□□□□□ -0.28
TRAP1-208ENST00000573872 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.28
TRAP1-208ENST00000573872 THADAQ6YHU6 1953 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 TNRC6BQ9UPQ9 1833 aaKnown RBP13.32□□□□□ -0.28
TRAP1-208ENST00000573872 TCRBV7S2A1N4TA0A589 114 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 GOLGA6L9A6NEM1 432 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 KCNK1O00180 336 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 KPNA3O00505 521 aaPredicted RBP13.32□□□□□ -0.28
TRAP1-208ENST00000573872 KRIT1O00522 736 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 SLC7A4O43246 635 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 RNASEH2AO75792 299 aaKnown RBP13.32□□□□□ -0.28
TRAP1-208ENST00000573872 HLA-DQB2P05538 268 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 ADPRHP54922 357 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 TAS2R38P59533 333 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 MAXP61244 160 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 AP1S1P61966 158 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 OTUD4Q01804 1114 aaKnown RBP13.32□□□□□ -0.28
TRAP1-208ENST00000573872 RAD51Q06609 339 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 XRCC4Q13426 336 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 GRM3Q14832 879 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 POM121L1PQ3SYA9 428 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 ZNF805Q5CZA5 627 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 RALGPS1Q5JS13 557 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 PIP5KL1Q5T9C9 394 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 NCEH1Q6PIU2 408 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 GDPD4Q6W3E5 623 aa13.32□□□□□ -0.28
TRAP1-208ENST00000573872 CEP68Q76N32 757 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms