RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 KLHL11Q9NVR0 708 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 DNAAF2Q9NVR5 837 aaKnown RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 KIAA1522Q9P206 1035 aaPredicted RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 VANGL2Q9ULK5 521 aa12.09□□□□□ -0.47
NDE1-206ENST00000572967 TTC7AQ9ULT0 858 aaPredicted RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 CNOT1A5YKK6 2376 aaKnown RBP12.09□□□□□ -0.47
NDE1-206ENST00000572967 hCG_1818297A0A087WSY0 165 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 EDDM13A0A1B0GTR0 161 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 A0A1B0GVT2 93 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 HYAL3O43820 417 aaPredicted RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 GJB3O75712 270 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 KRT37O76014 449 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 CD59P13987 128 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 VAV1P15498 845 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 GOT1P17174 413 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 MX2P20592 715 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 TGM2P21980 687 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ARSEP51690 589 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ECT2LQ008S8 904 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 BNC1Q01954 994 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ZNF177Q13360 481 aaPredicted RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 CST6Q15828 149 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 WHAMMP3Q1A5X7 153 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 RAB6CQ53S08 254 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 TXNRD3NBQ6F5E7 133 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 CXorf57Q6NSI4 855 aaKnown RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 MFSD7Q6UXD7 560 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ZNF783Q6ZMS7 281 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 BBS12Q6ZW61 710 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 CPNE8Q86YQ8 564 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 RTL3Q8N8U3 475 aaKnown RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 MNS1Q8NEH6 495 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 OR52K2Q8NGK3 314 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 TSC1Q92574 1164 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 IGSF8Q969P0 613 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 BIRC7Q96CA5 298 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 HAUS1Q96CS2 278 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 PSMB7Q99436 277 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 RAB6CQ9H0N0 254 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 RSPH9Q9H1X1 276 aaPredicted RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 HAUS2Q9NVX0 235 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 CWC15Q9P013 229 aaKnown RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 SUN2Q9UH99 717 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.08□□□□□ -0.48
NDE1-206ENST00000572967 SNX10Q9Y5X0 201 aa12.08□□□□□ -0.48
NDE1-206ENST00000572967 DRGXA6NNA5 263 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 WASH4PA8MWX3 477 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 C1QTNF9BB2RNN3 333 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 APOC4-APOC2K7ER74 178 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 SH3BP5O60239 455 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 RNASEH1O60930 286 aaKnown RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 RNASEH2AO75792 299 aaKnown RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 CER1O95813 267 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 APOC2P02655 101 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 C1QTNF9P0C862 333 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 PYGMP11217 842 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 NR2C2P49116 596 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 CSNK1EP49674 416 aaKnown RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 ZBTB16Q05516 673 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 DPYSQ14117 519 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 TAZQ16635 292 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 CA9Q16790 459 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 LONRF2Q1L5Z9 754 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 UNQ6494/PRO21346Q6UXR6 183 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 SETD3Q86TU7 594 aaPredicted RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 SLC13A5Q86YT5 568 aaPredicted RBP12.07□□□□□ -0.48
NDE1-206ENST00000572967 PYROXD2Q8N2H3 581 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 STK40Q8N2I9 435 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 ACTRT1Q8TDG2 376 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 BRD8Q9H0E9 1235 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 GAREM1Q9H706 876 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 TM9SF3Q9HD45 589 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 TMPRSS4Q9NRS4 437 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 TMEM248Q9NWD8 314 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 FBXL12Q9NXK8 326 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 SLCO3A1Q9UIG8 710 aa12.07□□□□□ -0.48
NDE1-206ENST00000572967 C3orf70A6NLC5 250 aaPredicted RBP12.06□□□□□ -0.48
NDE1-206ENST00000572967 UPK3BL1B0FP48 263 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 UPK3BL2E5RIL1 263 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 PLK4O00444 970 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 PPP1R12AO14974 1030 aaPredicted RBP12.06□□□□□ -0.48
NDE1-206ENST00000572967 MCF2LO15068 1137 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 CST8O60676 142 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 RAMP2O60895 175 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 FGGP02679 453 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 ERCC2P18074 760 aa12.06□□□□□ -0.48
NDE1-206ENST00000572967 OR1E1P30953 314 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms