RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 TRIM10Q9UDY6 481 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 SEPT3Q9UH03 358 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 PILRBQ9UKJ0 227 aa16.42■□□□□ 0.22
LITAF-210ENST00000571976 EP300Q09472 2414 aaPredicted RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 A0A0U1RQJ8 604 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 GRID2IPA4D2P6 1211 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 FAM47DPA6NHR8 397 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 MEI4A8MW99 385 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 APOL1O14791 398 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 MFSD11O43934 449 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 PEX11BO96011 259 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 ZNF806P0C7X5 589 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 TGM1P22735 817 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 GKP32189 559 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 CTNNA1P35221 906 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 GARSP41250 739 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 RENBPP51606 427 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 ADPRHP54922 357 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 GBE1Q04446 702 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 NSUN2Q08J23 767 aaKnown RBP eCLIP16.41■□□□□ 0.22
LITAF-210ENST00000571976 LBRQ14739 615 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 TAZQ16635 292 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 ZNF805Q5CZA5 627 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 AGBL4Q5VU57 503 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 KIAA0895LQ68EN5 471 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 MFSD7Q6UXD7 560 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 ERN2Q76MJ5 926 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 RGL4Q8IZJ4 473 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 SYCE1Q8N0S2 351 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 LRRC57Q8N9N7 239 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 TSEN2Q8NCE0 465 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 ARRDC3Q96B67 414 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 RBM41Q96IZ5 413 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 PSKH2Q96QS6 385 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 HDAC8Q9BY41 377 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 CPEB1Q9BZB8 566 aaKnown RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 C6orf106Q9H6K1 298 aaPredicted RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 PARD6AQ9NPB6 346 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 EVLQ9UI08 416 aaPredicted RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.41■□□□□ 0.22
LITAF-210ENST00000571976 PCDHA3Q9Y5H8 950 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 FAM186AA6NE01 2351 aa16.41■□□□□ 0.22
LITAF-210ENST00000571976 CCDC66A2RUB6 948 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 RNF103O00237 685 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 PLK4O00444 970 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 PLRG1O43660 514 aaKnown RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 KRT86O43790 486 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CCDC175P0C221 793 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 ITGB7P26010 798 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CTNNA2P26232 953 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 HSPA9P38646 679 aaKnown RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 CDKN2BP42772 138 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CSNK1DP48730 415 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CCZ1BP86790 482 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CCZ1P86791 482 aaPredicted RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 SLC10A7Q0GE19 358 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 TFDP2Q14188 446 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 GRM3Q14832 879 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CCDC6Q16204 474 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 PIP5KL1Q5T9C9 394 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 MARC1Q5VT66 337 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 PEAR1Q5VY43 1037 aaPredicted RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 TIGD7Q6NT04 549 aaPredicted RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 NCEH1Q6PIU2 408 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 GDPD4Q6W3E5 623 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 SPOCD1Q6ZMY3 1216 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 RABEPKQ7Z6M1 372 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 RFX6Q8HWS3 928 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 BBS5Q8N3I7 341 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 PLD5Q8N7P1 536 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 KRT35Q92764 455 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 FATE1Q969F0 183 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 VOPP1Q96AW1 172 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 BIRC7Q96CA5 298 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 EXOC2Q96KP1 924 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 TSGA13Q96PP4 275 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 TMEM74BQ9NUR3 256 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 DTLQ9NZJ0 730 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 TPX2Q9ULW0 747 aaKnown RBP16.4■□□□□ 0.22
LITAF-210ENST00000571976 ZNF292O60281 2723 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 CEP192Q8TEP8 1941 aa16.4■□□□□ 0.22
LITAF-210ENST00000571976 TBC1D3DA0A087WVF3 549 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 TBC1D3IA0A087WXS9 549 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 TBC1D3EA0A087X179 549 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 TBC1D3KA0A087X1G2 549 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 TBC1D3FA6NER0 549 aaPredicted RBP16.39■□□□□ 0.21
LITAF-210ENST00000571976 TBC1D3LB9A6J9 549 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 FSBPO95073 299 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 TBC1D3HP0C7X1 549 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 GNSP15586 552 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 CCNCP24863 283 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 MAPK8P45983 427 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 MARCKSL1P49006 195 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 CCR5P51681 352 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 NEK3P51956 506 aa16.39■□□□□ 0.21
LITAF-210ENST00000571976 SLC10A2Q12908 348 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms