RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 NPWQ8N729 165 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 FAM71BQ8TC56 605 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 VOPP1Q96AW1 172 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 PPP1R16AQ96I34 528 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 PDFQ9HBH1 243 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 PCDH18Q9HCL0 1135 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
TVP23B-204ENST00000571018 FRYLO94915 3013 aa12.88□□□□□ -0.35
TVP23B-204ENST00000571018 J3KR12 359 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 PRAMEF11O60813 436 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 GJB3O75712 270 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 AMPD1P23109 780 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 ITGB7P26010 798 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 MAN1A1P33908 653 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 NUDT1P36639 197 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 CSNK1EP49674 416 aaKnown RBP12.87□□□□□ -0.35
TVP23B-204ENST00000571018 RHOAP61586 193 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 PPP2CBP62714 309 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 PPP2CAP67775 309 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 FOXK2Q01167 660 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 BNC1Q01954 994 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 CYTH1Q15438 398 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 TEAD4Q15561 434 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 MYLK3Q32MK0 819 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 UAP1L1Q3KQV9 507 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 LCE2DQ5TA82 110 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-204ENST00000571018 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
TVP23B-204ENST00000571018 TRIM69Q86WT6 500 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-204ENST00000571018 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 OR6K2Q8NGY2 324 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 SLC35G2Q8TBE7 412 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 TSC1Q92574 1164 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 ZDHHC6Q9H6R6 413 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 RCOR3Q9P2K3 495 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-204ENST00000571018 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-204ENST00000571018 INTUQ9ULD6 942 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 MFHAS1Q9Y4C4 1052 aa12.87□□□□□ -0.35
TVP23B-204ENST00000571018 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 KRIT1O00522 736 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 VILLO15195 856 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 OPHN1O60890 802 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 MTA2O94776 668 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 IGSF6O95976 241 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 ADRB3P13945 408 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
TVP23B-204ENST00000571018 IL4RP24394 825 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 GKP32189 559 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
TVP23B-204ENST00000571018 ARSEP51690 589 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 NEK3P51956 506 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 CDH6P55285 790 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 TAS2R40P59535 323 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 RAD51Q06609 339 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 IL10RBQ08334 325 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 TCEAL1Q15170 157 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 ZNF805Q5CZA5 627 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 PPM1JQ5JR12 505 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 ATXN7L2Q5T6C5 722 aaPredicted RBP12.86□□□□□ -0.35
TVP23B-204ENST00000571018 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 TMCO3Q6UWJ1 677 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 CPNE8Q86YQ8 564 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 RHOT2Q8IXI1 618 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 SLC6A18Q96N87 628 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 ETNK2Q9NVF9 386 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 LHX3Q9UBR4 397 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 DMTF1Q9Y222 760 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
TVP23B-204ENST00000571018 UPK3BL1B0FP48 263 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 UPK3BL2E5RIL1 263 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 DFFAO00273 331 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 WNT9AO14904 365 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
TVP23B-204ENST00000571018 KCNK5O95279 499 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 LCA5LO95447 670 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 CD48P09326 243 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 MAT2AP31153 395 aaKnown RBP12.85□□□□□ -0.35
TVP23B-204ENST00000571018 ARHGAP25P42331 645 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 SLC14A1Q13336 389 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 KRT81Q14533 505 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 MESDQ14696 234 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 RFTN1Q14699 578 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-204ENST00000571018 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 HLA-BQ31612 363 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 ATP13A4Q4VNC1 1196 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 NAPEPLDQ6IQ20 393 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 GDPD4Q6W3E5 623 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 PARS2Q7L3T8 475 aaKnown RBP12.85□□□□□ -0.35
TVP23B-204ENST00000571018 TP53INP2Q8IXH6 220 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 NETO2Q8NC67 525 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 RFFLQ8WZ73 363 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 RAB7BQ96AH8 199 aa12.85□□□□□ -0.35
TVP23B-204ENST00000571018 SERAC1Q96JX3 654 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms