RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PCDHGB5Q9Y5G0 923 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ENTPD2Q9Y5L3 495 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 RAD54BQ9Y620 910 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 BRWD1Q9NSI6 2320 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF536O15090 1300 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 GRIN2DO15399 1336 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PRRC2BQ5JSZ5 2229 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CHD7Q9P2D1 2997 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 LRRC37A2A6NM11 1700 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 MAST4O15021 2626 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 C17orf113A0A1B0GUU1 675 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GXYLT2A0PJZ3 443 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GTPBP10A4D1E9 387 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 LIPT2A6NK58 231 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 FAM90A7PA6NKC0 464 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 FAM90A22PA8MWA6 464 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 FAM90A12PA8MX19 464 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 FAM90A23PA8MXZ1 464 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PI4K2BG5E9Z4 385 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GPAA1O43292 621 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TGFB1I1O43294 461 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CTIFO43310 598 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 B4GALT4O60513 344 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PRDM1O75626 825 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 HEXIM1O94992 359 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CSPG5O95196 566 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 QDPRP09417 244 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SUPT20HL2P0C7V6 817 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ACTN1P12814 892 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ATP6V1B1P15313 513 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TBXAS1P24557 533 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 IGFBP6P24592 240 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RBL1P28749 1068 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NTSR1P30989 418 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 UQCRC1P31930 480 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GRK5P34947 590 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 HTR7P34969 479 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RFC2P35250 354 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SLC1A4P43007 532 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 MSH2P43246 934 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NOVP48745 357 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TDO2P48775 406 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RABGGTBP53611 331 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RRADP55042 308 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CCL23P55773 120 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RPL7AP62424 266 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TIAL1Q01085 375 aaKnown RBP eCLIP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PPP2R5CQ13362 524 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TDGQ13569 410 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CCNIQ14094 377 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 USP10Q14694 798 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CLCA4Q14CN2 919 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ACOX1Q15067 660 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 KYNUQ16719 465 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 P3H1Q32P28 736 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ZMAT1Q5H9K5 638 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF766Q5HY98 468 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NOMO2Q5JPE7 1267 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GARNL3Q5VVW2 1013 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TAPT1Q6NXT6 567 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TAF2Q6P1X5 1199 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SLC30A10Q6XR72 485 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PIK3AP1Q6ZUJ8 805 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GPRIN1Q7Z2K8 1008 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ADGRE4PQ86SQ3 457 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 IGDCC3Q8IVU1 814 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 WDTC1Q8N5D0 677 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PSD4Q8NDX1 1056 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 GOT1L1Q8NHS2 421 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 POC1BQ8TC44 478 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PHOSPHO2Q8TCD6 241 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RABGGTAQ92696 567 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TFAP2CQ92754 450 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ZBTB8AQ96BR9 441 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ELP4Q96EB1 424 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SAAL1Q96ER3 474 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ZBTB45Q96K62 511 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NOX5Q96PH1 765 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CD180Q99467 661 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PTDSS2Q9BVG9 487 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TLR10Q9BXR5 811 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NACAP1Q9BZK3 213 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 TRPV6Q9H1D0 765 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 EPC1Q9H2F5 836 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SMARCAD1Q9H4L7 1026 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF552Q9H707 407 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SYNPO2LQ9H987 977 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 ERVMER34-1Q9H9K5 563 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 XAB2Q9HCS7 855 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PDE7BQ9NP56 450 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PCDHB16Q9NRJ7 776 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 CYP39A1Q9NYL5 469 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SARDHQ9UL12 918 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NDRG4Q9ULP0 352 aaKnown RBP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 COG5Q9UP83 839 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 RCE1Q9Y256 329 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SLC27A6Q9Y2P4 619 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.38□□□□□ -1.87
CNOT1-221ENST00000569924 NEU2Q9Y3R4 380 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms