RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 INPPL1O15357 1258 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CLPTM1O96005 669 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CTSAP10619 480 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CA4P22748 312 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 HOXD13P35453 343 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CORO7P57737 925 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ACTR1AP61163 376 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ARF3P61204 181 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 ARF1P84077 181 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 MSLNQ13421 630 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 PUM1Q14671 1186 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMG1-217ENST00000569764 KRT31Q15323 416 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ANKRD40Q6AI12 368 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 FUT10Q6P4F1 479 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PRPF31Q8WWY3 499 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 NELFBQ8WX92 580 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ART5Q96L15 291 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 TMEM74Q96NL1 305 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MRPL39Q9NYK5 338 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 WRAP73Q9P2S5 460 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 GSTTP1A0A1W2PQM5 241 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MACROD2A1Z1Q3 448 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SMIM30A4D0T7 59 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SOBPA7XYQ1 873 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SCAMP2O15127 329 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 MAFKO60675 156 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ZNF623O75123 536 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SMIM24O75264 130 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 GCATO75600 419 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PRKD3O94806 890 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 VTNP04004 478 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ALOX5P09917 674 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CBX5P45973 191 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CXCL12P48061 93 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SCNN1GP51170 649 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 DYNC1I2Q13409 638 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 C5orf22Q49AR2 442 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ZNF658Q5TYW1 1059 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 KLHDC7AQ5VTJ3 777 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MRM1Q6IN84 353 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 TTI2Q6NXR4 508 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PALB2Q86YC2 1186 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SYNPOQ8N3V7 929 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 NIPA2Q8N8Q9 360 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SYT2Q8N9I0 419 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 PPP1R14AQ96A00 147 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 DNAJC19Q96DA6 116 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 OR10A4Q9H209 315 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SLC39A2Q9NP94 309 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 TSC22D4Q9Y3Q8 395 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 IGLV3-22A0A075B6J6 115 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SLC9B1P1A6NJY1 282 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ACOD1A6NK06 481 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 HAT1O14929 419 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 BEST1O76090 585 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CXCL10P02778 98 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 C8AP07357 584 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SPATA31C1P0DKV0 1188 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 G0S2P27469 103 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 BCAR1P56945 870 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 NCF4Q15080 339 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 HSF5Q4G112 596 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 RASIP1Q5U651 963 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 KDM7AQ6ZMT4 941 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CYP4V2Q6ZWL3 525 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 ANKFN1Q8N957 763 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 OR52K1Q8NGK4 314 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 IL31RAQ8NI17 732 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SLC30A5Q8TAD4 765 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 THRSPQ92748 146 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MBOAT7Q96N66 472 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 RUBCNLQ9H714 662 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PKD2L2Q9NZM6 624 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 DERAQ9Y315 318 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 POMT1Q9Y6A1 747 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 GREM1O60565 184 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 GYPCP04921 128 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ANXA8P13928 327 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 AKT1P31749 480 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ACSL1P33121 698 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 HARS2P49590 506 aaKnown RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 DUSP3P51452 185 aaPredicted RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 CASP9P55211 416 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 C21orf59P57076 290 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 POLR2GP62487 172 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMG1-217ENST00000569764 NIPAL4Q0D2K0 466 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 LAMTOR4Q0VGL1 99 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 RAPSNQ13702 412 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SMAD2Q15796 467 aaKnown RBP6.75□□□□□ -1.33
SMG1-217ENST00000569764 TMEM119Q4V9L6 283 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 ANXA8L1Q5VT79 327 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 Q7L0L9 218 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 TUSC5Q8IXB3 177 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 SLC9A6Q92581 669 aa6.75□□□□□ -1.33
SMG1-217ENST00000569764 DNASE1L2Q92874 299 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms