RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SPINT1O43278 529 aa8.83□□□□□ -1
SMG1-216ENST00000569122 LEFTY1O75610 366 aa8.83□□□□□ -1
SMG1-216ENST00000569122 CNTN5O94779 1100 aa8.83□□□□□ -1
SMG1-216ENST00000569122 YEATS4O95619 227 aa8.83□□□□□ -1
SMG1-216ENST00000569122 DDAH2O95865 285 aa8.83□□□□□ -1
SMG1-216ENST00000569122 TRUB2O95900 331 aaKnown RBP8.83□□□□□ -1
SMG1-216ENST00000569122 FYNP06241 537 aa8.83□□□□□ -1
SMG1-216ENST00000569122 WT1P19544 449 aaPredicted RBP8.83□□□□□ -1
SMG1-216ENST00000569122 ITIH1P19827 911 aa8.83□□□□□ -1
SMG1-216ENST00000569122 HK3P52790 923 aa8.83□□□□□ -1
SMG1-216ENST00000569122 COPB1P53618 953 aaKnown RBP8.83□□□□□ -1
SMG1-216ENST00000569122 YWHAZP63104 245 aaKnown RBP8.83□□□□□ -1
SMG1-216ENST00000569122 CDK17Q00537 523 aa8.83□□□□□ -1
SMG1-216ENST00000569122 ARHGEF7Q14155 803 aa8.83□□□□□ -1
SMG1-216ENST00000569122 PHF19Q5T6S3 580 aa8.83□□□□□ -1
SMG1-216ENST00000569122 RETSATQ6NUM9 610 aa8.83□□□□□ -1
SMG1-216ENST00000569122 FBXL22Q6P050 247 aa8.83□□□□□ -1
SMG1-216ENST00000569122 FAM173BQ6P4H8 233 aa8.83□□□□□ -1
SMG1-216ENST00000569122 SETD3Q86TU7 594 aaPredicted RBP8.83□□□□□ -1
SMG1-216ENST00000569122 PIM3Q86V86 326 aa8.83□□□□□ -1
SMG1-216ENST00000569122 HEATR4Q86WZ0 1026 aa8.83□□□□□ -1
SMG1-216ENST00000569122 RBFAQ8N0V3 343 aa8.83□□□□□ -1
SMG1-216ENST00000569122 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
SMG1-216ENST00000569122 TEX19Q8NA77 164 aa8.83□□□□□ -1
SMG1-216ENST00000569122 SEMA4DQ92854 862 aa8.83□□□□□ -1
SMG1-216ENST00000569122 NKD1Q969G9 470 aa8.83□□□□□ -1
SMG1-216ENST00000569122 KIAA1143Q96AT1 154 aaPredicted RBP8.83□□□□□ -1
SMG1-216ENST00000569122 EEF2KMTQ96G04 330 aa8.83□□□□□ -1
SMG1-216ENST00000569122 PRMT1Q99873 361 aaKnown RBP8.83□□□□□ -1
SMG1-216ENST00000569122 HEPHQ9BQS7 1158 aa8.83□□□□□ -1
SMG1-216ENST00000569122 ASPSCR1Q9BZE9 553 aa8.83□□□□□ -1
SMG1-216ENST00000569122 EDEM3Q9BZQ6 932 aa8.83□□□□□ -1
SMG1-216ENST00000569122 ZNF71Q9NQZ8 489 aaPredicted RBP8.83□□□□□ -1
SMG1-216ENST00000569122 FOXJ2Q9P0K8 574 aa8.83□□□□□ -1
SMG1-216ENST00000569122 XPO7Q9UIA9 1087 aaKnown RBP8.83□□□□□ -1
SMG1-216ENST00000569122 PCDHGA3Q9Y5H0 932 aa8.83□□□□□ -1
SMG1-216ENST00000569122 OR51B4Q9Y5P0 310 aa8.83□□□□□ -1
SMG1-216ENST00000569122 TEP1Q99973 2627 aaKnown RBP8.83□□□□□ -1
SMG1-216ENST00000569122 PIK3R2O00459 728 aa8.82□□□□□ -1
SMG1-216ENST00000569122 RASGRP1O95267 797 aa8.82□□□□□ -1
SMG1-216ENST00000569122 RHOCP08134 193 aa8.82□□□□□ -1
SMG1-216ENST00000569122 EPB41P11171 864 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 SYT1P21579 422 aa8.82□□□□□ -1
SMG1-216ENST00000569122 ELAVL4P26378 380 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 CASP1P29466 404 aa8.82□□□□□ -1
SMG1-216ENST00000569122 MAN1A1P33908 653 aa8.82□□□□□ -1
SMG1-216ENST00000569122 EIF4A3P38919 411 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 NOP2P46087 812 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 AUHQ13825 339 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 DPY19L3Q6ZPD9 716 aa8.82□□□□□ -1
SMG1-216ENST00000569122 PLPP6Q8IY26 295 aa8.82□□□□□ -1
SMG1-216ENST00000569122 PCDH20Q8N6Y1 951 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 Q8N9G6 341 aaPredicted RBP8.82□□□□□ -1
SMG1-216ENST00000569122 DCAF4L2Q8NA75 395 aa8.82□□□□□ -1
SMG1-216ENST00000569122 KYQ8NBH2 561 aa8.82□□□□□ -1
SMG1-216ENST00000569122 GALNT11Q8NCW6 608 aa8.82□□□□□ -1
SMG1-216ENST00000569122 PCDH19Q8TAB3 1148 aa8.82□□□□□ -1
SMG1-216ENST00000569122 GRIN3AQ8TCU5 1115 aa8.82□□□□□ -1
SMG1-216ENST00000569122 STK32AQ8WU08 396 aa8.82□□□□□ -1
SMG1-216ENST00000569122 CENPTQ96BT3 561 aa8.82□□□□□ -1
SMG1-216ENST00000569122 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
SMG1-216ENST00000569122 SLC45A3Q96JT2 553 aa8.82□□□□□ -1
SMG1-216ENST00000569122 CLPBQ9H078 707 aa8.82□□□□□ -1
SMG1-216ENST00000569122 THAP9Q9H5L6 903 aa8.82□□□□□ -1
SMG1-216ENST00000569122 UPF2Q9HAU5 1272 aaKnown RBP8.82□□□□□ -1
SMG1-216ENST00000569122 ST7Q9NRC1 585 aa8.82□□□□□ -1
SMG1-216ENST00000569122 SIRPGQ9P1W8 387 aa8.82□□□□□ -1
SMG1-216ENST00000569122 GGT7Q9UJ14 662 aa8.82□□□□□ -1
SMG1-216ENST00000569122 COQ4Q9Y3A0 265 aa8.82□□□□□ -1
SMG1-216ENST00000569122 RNF215Q9Y6U7 377 aa8.82□□□□□ -1
SMG1-216ENST00000569122 CXorf51AA0A1B0GTR3 108 aa8.81□□□□□ -1
SMG1-216ENST00000569122 PRR19A6NJB7 356 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CETN3O15182 167 aa8.81□□□□□ -1
SMG1-216ENST00000569122 NUDT21O43809 227 aaKnown RBP8.81□□□□□ -1
SMG1-216ENST00000569122 KLRC4O43908 158 aa8.81□□□□□ -1
SMG1-216ENST00000569122 TM7SF2O76062 418 aa8.81□□□□□ -1
SMG1-216ENST00000569122 RHOBTB3O94955 611 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CPNE6O95741 557 aa8.81□□□□□ -1
SMG1-216ENST00000569122 MT-CO1P00395 513 aa8.81□□□□□ -1
SMG1-216ENST00000569122 TNFP01375 233 aa8.81□□□□□ -1
SMG1-216ENST00000569122 IGLV3-25P01717 112 aa8.81□□□□□ -1
SMG1-216ENST00000569122 GLI1P08151 1106 aa8.81□□□□□ -1
SMG1-216ENST00000569122 RRM1P23921 792 aa8.81□□□□□ -1
SMG1-216ENST00000569122 MAP4P27816 1152 aaKnown RBP8.81□□□□□ -1
SMG1-216ENST00000569122 ETV5P41161 510 aa8.81□□□□□ -1
SMG1-216ENST00000569122 RPL34P49207 117 aaKnown RBP8.81□□□□□ -1
SMG1-216ENST00000569122 NUMBP49757 651 aa8.81□□□□□ -1
SMG1-216ENST00000569122 TRA2AQ13595 282 aaKnown RBP eCLIP8.81□□□□□ -1
SMG1-216ENST00000569122 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
SMG1-216ENST00000569122 MAP9Q49MG5 647 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CRTC2Q53ET0 693 aaPredicted RBP8.81□□□□□ -1
SMG1-216ENST00000569122 CARD16Q5EG05 197 aa8.81□□□□□ -1
SMG1-216ENST00000569122 CERCAMQ5T4B2 595 aa8.81□□□□□ -1
SMG1-216ENST00000569122 SYPL2Q5VXT5 272 aa8.81□□□□□ -1
SMG1-216ENST00000569122 C22orf39Q6P5X5 142 aa8.81□□□□□ -1
SMG1-216ENST00000569122 OGFOD3Q6PK18 319 aa8.81□□□□□ -1
SMG1-216ENST00000569122 SHC4Q6S5L8 630 aa8.81□□□□□ -1
SMG1-216ENST00000569122 TMEM270Q6UE05 265 aa8.81□□□□□ -1
SMG1-216ENST00000569122 LRRC31Q6UY01 552 aa8.81□□□□□ -1
SMG1-216ENST00000569122 ZNF783Q6ZMS7 281 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms