RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ISCUQ9H1K1 167 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 CAAP1Q9H8G2 361 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 ERVMER34-1Q9H9K5 563 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 FZD3Q9NPG1 666 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 GDF3Q9NR23 364 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PARVAQ9NVD7 372 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 GPATCH2LQ9NWQ4 482 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 LHX3Q9UBR4 397 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 NENFQ9UMX5 172 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 AP4E1Q9UPM8 1137 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 MSRB2Q9Y3D2 182 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 FADS3Q9Y5Q0 445 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TRPM6Q9BX84 2022 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 ANKRD11Q6UB99 2663 aaPredicted RBP7.96□□□□□ -1.14
CDH3-209ENST00000569080 LRRK1Q38SD2 2015 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ANKRD62A6NC57 917 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ZSCAN5CA6NGD5 496 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 RASA4BC9J798 803 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 PRAMEF26H0Y7S4 382 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 AREL1O15033 823 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 RAD51BO15315 384 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 FGF10O15520 208 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 RASA4O43374 803 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 AP1G1O43747 822 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 CREB3O43889 395 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 SERPINC1P01008 464 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 FTLP02792 175 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 SKILP12757 684 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 TCF4P15884 667 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 IL1R2P27930 398 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 RECQLP46063 649 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 GEMIN4P57678 1058 aaKnown RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 YBEYP58557 167 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 KLHL30Q0D2K2 578 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 OVGP1Q12889 678 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 SERINC3Q13530 473 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 POLD3Q15054 466 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 ZSCAN23Q3MJ62 389 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 PARP15Q460N3 678 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 INO80DQ53TQ3 878 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 ATXN7L2Q5T6C5 722 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 SCYL2Q6P3W7 929 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ABI3BPQ7Z7G0 1075 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 PRPF39Q86UA1 669 aaKnown RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 GATAD2AQ86YP4 633 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ARHGAP12Q8IWW6 846 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 SLC22A18ASQ8N1D0 253 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 NETO2Q8NC67 525 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 SYN2Q92777 582 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 KLK6Q92876 244 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ZNF653Q96CK0 615 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 PPP1R16AQ96I34 528 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 LRIG1Q96JA1 1093 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 CDC6Q99741 560 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ZDHHC6Q9H6R6 413 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 HECAQ9UBI9 543 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 CNOT8Q9UFF9 292 aaKnown RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 GGT7Q9UJ14 662 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 ITM2BQ9Y287 266 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 FARP1Q9Y4F1 1045 aaPredicted RBP7.95□□□□□ -1.14
CDH3-209ENST00000569080 ANKRD36A6QL64 1941 aa7.95□□□□□ -1.14
CDH3-209ENST00000569080 COL27A1Q8IZC6 1860 aaPredicted RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 LRP4O75096 1905 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 A0A087X0T9 212 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 TSPAN11A1L157 253 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 EIF3CLB5ME19 914 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 SLC31A1O15431 190 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 YKT6O15498 198 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 TNFSF14O43557 240 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 PRAMEF11O60813 436 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 KRT37O76014 449 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 UGT2B4P06133 528 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 FAM228BP0C875 321 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 MYBL1P10243 752 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 HNRNPA2B1P22626 353 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 MIPP30301 263 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 RGRP47804 291 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 CLDN2P57739 230 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 TPI1P60174 286 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 SNRPD1P62314 119 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 SLC25A11Q02978 314 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 DPYSQ14117 519 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 SUZ12Q15022 739 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 CYTH1Q15438 398 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 SLC45A4Q5BKX6 768 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 ZNF805Q5CZA5 627 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 KIAA1161Q6NSJ0 714 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 KYAT3Q6YP21 454 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 KDM7AQ6ZMT4 941 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 RFX8Q6ZV50 586 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 PSTKQ8IV42 348 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 OXR1Q8N573 874 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 OR13H1Q8NG92 308 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 CASKIN2Q8WXE0 1202 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 TSC1Q92574 1164 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 SKA1Q96BD8 255 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 EXOC2Q96KP1 924 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms