RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 ESAMQ96AP7 390 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ZNF560Q96MR9 790 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 HBEGFQ99075 208 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 COQ10BQ9H8M1 238 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 PREBQ9HCU5 417 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 RBM22Q9NW64 420 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SSC5DA1L4H1 1573 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 F8W810 466 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 PPP6CO00743 305 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 GRID2O43424 1007 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 TIMM44O43615 452 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CCDC166P0CW27 439 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SETSIPP0DME0 302 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 GRIA3P42263 894 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 HARS2P49590 506 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SLC26A2P50443 739 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CLCNKBP51801 687 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 PSME3P61289 254 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 FAM83EQ2M2I3 478 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 MYLK3Q32MK0 819 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ARL13BQ3SXY8 428 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 MAP3K21Q5TCX8 1036 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 STEAP4Q687X5 459 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 AAGABQ6PD74 315 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 TIFABQ6ZNK6 161 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ERO1BQ86YB8 467 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CPNE9Q8IYJ1 553 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SENP8Q96LD8 212 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 RTKNQ9BST9 563 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 DUSP16Q9BY84 665 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 C1orf21Q9H246 121 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 DMAP1Q9NPF5 467 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 OXSMQ9NWU1 459 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 RAP2CQ9Y3L5 183 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 LAMA2P24043 3122 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ARHGEF37A1IGU5 675 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 MATN2O00339 956 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ALDH1A2O94788 518 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SLC35E2BP0CK96 405 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SMIM10L2AP0DMW4 78 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SMIM10L2BP0DMW5 78 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 PCSK6P29122 969 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ACADSBP45954 432 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SCNN1GP51170 649 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 SLC7A2P52569 658 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 INHBCP55103 352 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 FASTKQ14296 549 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 TAPT1Q6NXT6 567 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CHST15Q7LFX5 561 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 STRADAQ7RTN6 431 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 TAC4Q86UU9 113 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 KBTBD6Q86V97 674 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 LCA5Q86VQ0 697 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ZC3HC1Q86WB0 502 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CIR1Q86X95 450 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 MFSD6LQ8IWD5 586 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 OFCC1Q8IZS5 231 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 ZNF786Q8N393 782 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 PAF1Q8N7H5 531 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CNTD1Q8N815 330 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CYGBQ8WWM9 190 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 TMEM209Q96SK2 561 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 FAM192AQ9GZU8 254 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 EFCAB1Q9HAE3 211 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 NT5MQ9NPB1 228 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 CRTAC1Q9NQ79 661 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 STK39Q9UEW8 545 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 TDRKHQ9Y2W6 561 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 IPPQ9Y573 584 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 KCTD3Q9Y597 815 aa9.07□□□□□ -0.96
HDGFL3-206ENST00000568294 UBA6A0AVT1 1052 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 HACD1B0YJ81 288 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 CRCPO75575 148 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 B3GAT3O94766 335 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 SIX3O95343 332 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 FAM58BPP0C7Q3 252 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 MYBPC1Q00872 1141 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 NSUN2Q08J23 767 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 CDH17Q12864 832 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 RPS6KA2Q15349 733 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 DCAF4L1Q3SXM0 396 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 PGM2L1Q6PCE3 622 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 UGT2A3Q6UWM9 527 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 CENPLQ8N0S6 344 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 CYP2S1Q96SQ9 504 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 COLEC11Q9BWP8 271 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 NCKIPSDQ9NZQ3 722 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 THEGQ9P2T0 379 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 EPS15L1Q9UBC2 864 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 COMMD10Q9Y6G5 202 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 RNF103-CHMP3A0A140T963 221 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 ERI2A8K979 691 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 PLOD2O00469 737 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 DAB1O75553 588 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 MMP3P08254 477 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 MAGEA6P43360 314 aa9.06□□□□□ -0.96
HDGFL3-206ENST00000568294 YAP1P46937 504 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms