RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 CTNNBL1Q8WYA6 563 aaPredicted RBP17.4■□□□□ 0.38
KNOP1-205ENST00000568230 CELF6Q96J87 481 aaKnown RBP17.4■□□□□ 0.38
KNOP1-205ENST00000568230 GDAP1L1Q96MZ0 367 aa17.4■□□□□ 0.38
KNOP1-205ENST00000568230 PACSIN1Q9BY11 444 aa17.4■□□□□ 0.38
KNOP1-205ENST00000568230 DEF6Q9H4E7 631 aa17.4■□□□□ 0.38
KNOP1-205ENST00000568230 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
KNOP1-205ENST00000568230 DMTF1Q9Y222 760 aa17.4■□□□□ 0.38
KNOP1-205ENST00000568230 FNDC3AQ9Y2H6 1198 aaKnown RBP17.4■□□□□ 0.38
KNOP1-205ENST00000568230 ASPMQ8IZT6 3477 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 ARHGAP42A6NI28 874 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 H3BRJ5 948 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 GIPC1O14908 333 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 AKR1B10O60218 316 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 PRAMEF11O60813 436 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 H2AFZP0C0S5 128 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 RARAP10276 462 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 GKP32189 559 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 CTSKP43235 329 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 NEK3P51956 506 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 SETMARQ53H47 684 aaPredicted RBP17.39■□□□□ 0.37
KNOP1-205ENST00000568230 ATXN7L2Q5T6C5 722 aaPredicted RBP17.39■□□□□ 0.37
KNOP1-205ENST00000568230 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 NAPEPLDQ6IQ20 393 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 H2AFVQ71UI9 128 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 PARS2Q7L3T8 475 aaKnown RBP17.39■□□□□ 0.37
KNOP1-205ENST00000568230 POLNQ7Z5Q5 900 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 PRPF39Q86UA1 669 aaKnown RBP17.39■□□□□ 0.37
KNOP1-205ENST00000568230 RYBPQ8N488 228 aaPredicted RBP17.39■□□□□ 0.37
KNOP1-205ENST00000568230 DEFB124Q8NES8 71 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 TSC1Q92574 1164 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 HSPH1Q92598 858 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 SERAC1Q96JX3 654 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 CHP1Q99653 195 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 OSBPL1AQ9BXW6 950 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 SLC39A8Q9C0K1 460 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 GAREM1Q9H706 876 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 IL21RQ9HBE5 538 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 LHX3Q9UBR4 397 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 UBA2Q9UBT2 640 aaPredicted RBP17.39■□□□□ 0.37
KNOP1-205ENST00000568230 SNX11Q9Y5W9 270 aa17.39■□□□□ 0.37
KNOP1-205ENST00000568230 TRPM6Q9BX84 2022 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 A0A1W2PR77 199 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 WNT9AO14904 365 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 POP4O95707 220 aaKnown RBP17.38■□□□□ 0.37
KNOP1-205ENST00000568230 IGSF6O95976 241 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 WNT1P04628 370 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 ADRB3P13945 408 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 MAT2AP31153 395 aaKnown RBP17.38■□□□□ 0.37
KNOP1-205ENST00000568230 ARL4AP40617 200 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 PAPOLAP51003 745 aaKnown RBP17.38■□□□□ 0.37
KNOP1-205ENST00000568230 RHOAP61586 193 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 MYLK3Q32MK0 819 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 ZNF805Q5CZA5 627 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 ADAT2Q7Z6V5 191 aaKnown RBP17.38■□□□□ 0.37
KNOP1-205ENST00000568230 CSPG4P5Q96PW8 444 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 TRIM5Q9C035 493 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 SLC32A1Q9H598 525 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 NHEJ1Q9H9Q4 299 aaPredicted RBP17.38■□□□□ 0.37
KNOP1-205ENST00000568230 PCDH18Q9HCL0 1135 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 CTTNBP2NLQ9P2B4 639 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 MFHAS1Q9Y4C4 1052 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 EPG5Q9HCE0 2579 aa17.38■□□□□ 0.37
KNOP1-205ENST00000568230 A0A1W2PQU0 124 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 AKR1B15C9JRZ8 316 aaPredicted RBP17.37■□□□□ 0.37
KNOP1-205ENST00000568230 J3KR12 359 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 KRIT1O00522 736 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 AP1G1O43747 822 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 RNGTTO60942 597 aaKnown RBP17.37■□□□□ 0.37
KNOP1-205ENST00000568230 PROSCO94903 275 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 UGT2B4P06133 528 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 TMEM253P0C7T8 217 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 CD38P28907 300 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 C21orf59P57076 290 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 CYTH1Q15438 398 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 ZNF423Q2M1K9 1284 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 TMEM259Q4ZIN3 620 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 N4BP2L1Q5TBK1 243 aaPredicted RBP17.37■□□□□ 0.37
KNOP1-205ENST00000568230 HORMAD1Q86X24 394 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 LZTR1Q8N653 840 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 FAM71BQ8TC56 605 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 SKA1Q96BD8 255 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 CCDC42Q96M95 316 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 AASDHPPTQ9NRN7 309 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 TM7SF3Q9NS93 570 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 SPTLC3Q9NUV7 552 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 RCOR3Q9P2K3 495 aaPredicted RBP17.37■□□□□ 0.37
KNOP1-205ENST00000568230 LCMT1Q9UIC8 334 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 PCDHGB2Q9Y5G2 931 aa17.37■□□□□ 0.37
KNOP1-205ENST00000568230 FRYQ5TBA9 3013 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 C16orf96A6NNT2 1141 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 MAN1A1P33908 653 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 ZNF284Q2VY69 593 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 FBXL19Q6PCT2 694 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 IQCHQ86VS3 1027 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 NAXDQ8IW45 347 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 TMEM145Q8NBT3 493 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 NETO2Q8NC67 525 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 RAB7BQ96AH8 199 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 SP110Q9HB58 689 aa17.36■□□□□ 0.37
KNOP1-205ENST00000568230 ETNK2Q9NVF9 386 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms