RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 USP21Q9UK80 565 aa11.03□□□□□ -0.64
PALB2-206ENST00000568219 CNOT6Q9ULM6 557 aaKnown RBP11.03□□□□□ -0.64
PALB2-206ENST00000568219 HS6ST1O60243 411 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 ADSLP30566 484 aaPredicted RBP11.02□□□□□ -0.64
PALB2-206ENST00000568219 CHRNB3Q05901 458 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 PIGFQ07326 219 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 FAM35AQ86V20 835 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 BBS5Q8N3I7 341 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 FBXL18Q96ME1 805 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 ZNF778Q96MU6 729 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 TBCDQ9BTW9 1192 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 DHRS4Q9BTZ2 278 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 ELOVL4Q9GZR5 314 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 PORCNQ9H237 461 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 ARHGAP28Q9P2N2 729 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 CRYL1Q9Y2S2 319 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 CCDC88AQ3V6T2 1871 aa11.02□□□□□ -0.64
PALB2-206ENST00000568219 A0A087WZ62 844 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 FAM95CA0A1B0GW59 222 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 H3BNH8 94 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 PLOD2O00469 737 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 BCAS2O75934 225 aaPredicted RBP11.02□□□□□ -0.65
PALB2-206ENST00000568219 MYO1DO94832 1006 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 CD1EP15812 388 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 TTKP33981 857 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 SLC6A3Q01959 620 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 ARL13BQ3SXY8 428 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 SGO1Q5FBB7 561 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 SPANXN3Q5MJ09 141 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 CES4AQ5XG92 561 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 PAGE2Q7Z2X7 111 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 TTC30AQ86WT1 665 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 NT5DC4Q86YG4 428 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 DEFB106AQ8N104 65 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 NCSTNQ92542 709 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 C17orf80Q9BSJ5 609 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 ALG9Q9H6U8 611 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 FBRSL1Q9HCM7 1045 aaKnown RBP11.02□□□□□ -0.65
PALB2-206ENST00000568219 ITM2CQ9NQX7 267 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 DDIT4Q9NX09 232 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 PLK2Q9NYY3 685 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 KLK14Q9P0G3 267 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 CYTH4Q9UIA0 394 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 YWHAQP27348 245 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 RXRBP28702 533 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 BAG6P46379 1132 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 OXCT1P55809 520 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 BROXQ5VW32 411 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 PMF1Q6P1K2 205 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 FRA10AC1Q70Z53 315 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 RALGPS2Q86X27 583 aaPredicted RBP11.02□□□□□ -0.65
PALB2-206ENST00000568219 RAVER1Q8IY67 606 aaKnown RBP11.02□□□□□ -0.65
PALB2-206ENST00000568219 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 SLC15A4Q8N697 577 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 ARFGAP1Q8N6T3 406 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 DCBLD1Q8N8Z6 715 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.65
PALB2-206ENST00000568219 OR2T34Q8NGX1 318 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 OR2T3Q8NH03 318 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 DACT3Q96B18 629 aaPredicted RBP11.02□□□□□ -0.65
PALB2-206ENST00000568219 BDH2Q9BUT1 245 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 UNC93B1Q9H1C4 597 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 EXD2Q9NVH0 621 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 DPP3Q9NY33 737 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 GIMAP2Q9UG22 337 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 RIPK3Q9Y572 518 aa11.02□□□□□ -0.65
PALB2-206ENST00000568219 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
PALB2-206ENST00000568219 PMM2O15305 246 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 B4GAT1O43505 415 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 H2AFYO75367 372 aaKnown RBP11.01□□□□□ -0.65
PALB2-206ENST00000568219 CABYRO75952 493 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 ATE1O95260 518 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 SEC24AO95486 1093 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 S100A5P33763 92 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 HADHAP40939 763 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 BMXP51813 675 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 CNTN2Q02246 1040 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 UBE3AQ05086 875 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 PMS2P3Q13401 168 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 FRG1Q14331 258 aaKnown RBP11.01□□□□□ -0.65
PALB2-206ENST00000568219 CCDC85BQ15834 202 aaPredicted RBP11.01□□□□□ -0.65
PALB2-206ENST00000568219 INAQ16352 499 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 RBBP7Q16576 425 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 AGAP9Q5VTM2 703 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 THOC7Q6I9Y2 204 aaKnown RBP11.01□□□□□ -0.65
PALB2-206ENST00000568219 PGM2L1Q6PCE3 622 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 DENND6AQ8IWF6 608 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 PQLC3Q8N755 202 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 C17orf50Q8WW18 174 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 FAM151AQ8WW52 585 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 NSMCE2Q96MF7 247 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 CSPG4P5Q96PW8 444 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 SH3GL1Q99961 368 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 EXOSC4Q9NPD3 245 aaKnown RBP11.01□□□□□ -0.65
PALB2-206ENST00000568219 TMPRSS4Q9NRS4 437 aa11.01□□□□□ -0.65
PALB2-206ENST00000568219 TBC1D13Q9NVG8 400 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms