RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 MYO1FO00160 1098 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 H2AFZP0C0S5 128 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 CCNHP51946 323 aaPredicted RBP25.6■■□□□ 1.69
FANCA-228ENST00000567943 SIM1P81133 766 aaPredicted RBP25.6■■□□□ 1.69
FANCA-228ENST00000567943 ZNF423Q2M1K9 1284 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 SMTNL2Q2TAL5 461 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 PARP15Q460N3 678 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 RFX8Q6ZV50 586 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 H2AFVQ71UI9 128 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 SERAC1Q96JX3 654 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 HDAC8Q9BY41 377 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 TM6SF2Q9BZW4 377 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 SPTLC3Q9NUV7 552 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 DONSONQ9NYP3 566 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 ANGPTL2Q9UKU9 493 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 TRPM6Q9BX84 2022 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 BUB1O43683 1085 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 CD38P28907 300 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 GKP32189 559 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 BOLA3Q53S33 107 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 ERN2Q76MJ5 926 aaKnown RBP25.59■■□□□ 1.69
FANCA-228ENST00000567943 PLPP6Q8IY26 295 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 NETO2Q8NC67 525 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 HSPH1Q92598 858 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 HEPHQ9BQS7 1158 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 HECAQ9UBI9 543 aaPredicted RBP25.59■■□□□ 1.69
FANCA-228ENST00000567943 PCOLCE2Q9UKZ9 415 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 TPX2Q9ULW0 747 aaKnown RBP25.59■■□□□ 1.69
FANCA-228ENST00000567943 PCDHGB2Q9Y5G2 931 aa25.59■■□□□ 1.69
FANCA-228ENST00000567943 ZSCAN5CA6NGD5 496 aaPredicted RBP25.58■■□□□ 1.69
FANCA-228ENST00000567943 ERCC2P18074 760 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 ZNF75DP51815 510 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 FOXC1Q12948 553 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 PRAMEF14Q5SWL7 426 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 TXNRD3NBQ6F5E7 133 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 ADAT2Q7Z6V5 191 aaKnown RBP25.58■■□□□ 1.69
FANCA-228ENST00000567943 OR6K2Q8NGY2 324 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 CELF6Q96J87 481 aaKnown RBP25.58■■□□□ 1.69
FANCA-228ENST00000567943 PREBQ9HCU5 417 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 AASDHPPTQ9NRN7 309 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 CWC15Q9P013 229 aaKnown RBP25.58■■□□□ 1.69
FANCA-228ENST00000567943 UVRAGQ9P2Y5 699 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 BTBD3Q9Y2F9 522 aa25.58■■□□□ 1.69
FANCA-228ENST00000567943 TMEM253P0C7T8 217 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 RARAP10276 462 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 SPINK2P20155 84 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 SSR1P43307 286 aaKnown RBP25.57■■□□□ 1.68
FANCA-228ENST00000567943 ZNF135P52742 658 aaPredicted RBP25.57■■□□□ 1.68
FANCA-228ENST00000567943 NDST2P52849 883 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 SERINC3Q13530 473 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 DPYSL2Q16555 572 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 NAPEPLDQ6IQ20 393 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 PRPF39Q86UA1 669 aaKnown RBP25.57■■□□□ 1.68
FANCA-228ENST00000567943 BAHD1Q8TBE0 780 aaPredicted RBP25.57■■□□□ 1.68
FANCA-228ENST00000567943 LRRC19Q9H756 370 aa25.57■■□□□ 1.68
FANCA-228ENST00000567943 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.57■■□□□ 1.68
FANCA-228ENST00000567943 H3BRJ5 948 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 RNGTTO60942 597 aaKnown RBP25.56■■□□□ 1.68
FANCA-228ENST00000567943 ITGB7P26010 798 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 HCAR3P49019 387 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 C21orf59P57076 290 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 SLC25A11Q02978 314 aaKnown RBP25.56■■□□□ 1.68
FANCA-228ENST00000567943 SHBQ15464 509 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 TRIP6Q15654 476 aaKnown RBP25.56■■□□□ 1.68
FANCA-228ENST00000567943 ATXN7L2Q5T6C5 722 aaPredicted RBP25.56■■□□□ 1.68
FANCA-228ENST00000567943 RYBPQ8N488 228 aaPredicted RBP25.56■■□□□ 1.68
FANCA-228ENST00000567943 TC2NQ8N9U0 490 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 TEKT4Q8WW24 435 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 SLC39A8Q9C0K1 460 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 ZDHHC6Q9H6R6 413 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 DYRK4Q9NR20 520 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 ZFR2Q9UPR6 939 aaKnown RBP25.56■■□□□ 1.68
FANCA-228ENST00000567943 CA5BQ9Y2D0 317 aa25.56■■□□□ 1.68
FANCA-228ENST00000567943 A0A1W2PQU0 124 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 TMCC1O94876 653 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 GSRP00390 522 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 ARL4AP40617 200 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 IL9RQ01113 521 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 DPYSQ14117 519 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 ZNF284Q2VY69 593 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 NEK5Q6P3R8 708 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 PARS2Q7L3T8 475 aaKnown RBP25.55■■□□□ 1.68
FANCA-228ENST00000567943 SPATS2Q86XZ4 545 aaKnown RBP25.55■■□□□ 1.68
FANCA-228ENST00000567943 CPNE8Q86YQ8 564 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 OR2AP1Q8NGE2 309 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 SETD7Q8WTS6 366 aaKnown RBP25.55■■□□□ 1.68
FANCA-228ENST00000567943 KLK6Q92876 244 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 DMTF1Q9Y222 760 aa25.55■■□□□ 1.68
FANCA-228ENST00000567943 A0A1B0GTQ1 180 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 ARHGAP42A6NI28 874 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 TLR4O00206 839 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 PCDHGA12O60330 932 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 PROSCO94903 275 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 ADRB3P13945 408 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 PRLRP16471 622 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 PAPOLAP51003 745 aaKnown RBP25.54■■□□□ 1.68
FANCA-228ENST00000567943 SNRPD1P62314 119 aaKnown RBP25.54■■□□□ 1.68
FANCA-228ENST00000567943 HNRNPDQ14103 355 aaKnown RBP25.54■■□□□ 1.68
FANCA-228ENST00000567943 HADHQ16836 314 aaKnown RBP25.54■■□□□ 1.68
FANCA-228ENST00000567943 POLNQ7Z5Q5 900 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms