RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ABCG4Q9H172 646 aa18.93■□□□□ 0.62
LINC01238-205ENST00000567549 DNAJC28Q9NX36 388 aa18.93■□□□□ 0.62
LINC01238-205ENST00000567549 ZNF212Q9UDV6 495 aa18.93■□□□□ 0.62
LINC01238-205ENST00000567549 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
LINC01238-205ENST00000567549 CSNK1G3Q9Y6M4 447 aa18.93■□□□□ 0.62
LINC01238-205ENST00000567549 ARID1BQ8NFD5 2236 aaPredicted RBP18.93■□□□□ 0.62
LINC01238-205ENST00000567549 ZFYVE26Q68DK2 2539 aa18.93■□□□□ 0.62
LINC01238-205ENST00000567549 C2CD4BA6NLJ0 364 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 SCAMP1O15126 338 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 PLEKP08567 350 aaPredicted RBP18.92■□□□□ 0.62
LINC01238-205ENST00000567549 CKMT1AP12532 417 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 GPD1P21695 349 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 FMO1Q01740 532 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 SEMG2Q02383 582 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 GRM3Q14832 879 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 KRT31Q15323 416 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 CCDC14Q49A88 953 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 MANEALQ5VSG8 457 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 CDKAL1Q5VV42 579 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 SLFN11Q7Z7L1 901 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 DCBLD1Q8N8Z6 715 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 C3orf20Q8ND61 904 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 FAM172AQ8WUF8 416 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 ARHGEF2Q92974 986 aaKnown RBP18.92■□□□□ 0.62
LINC01238-205ENST00000567549 GDAP1L1Q96MZ0 367 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 DEPDC7Q96QD5 511 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 EPAS1Q99814 870 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 TM6SF2Q9BZW4 377 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 CATSPERBQ9H7T0 1116 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 NLRC4Q9NPP4 1024 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 TMPRSS4Q9NRS4 437 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 ANO10Q9NW15 660 aa18.92■□□□□ 0.62
LINC01238-205ENST00000567549 FCF1Q9Y324 198 aaKnown RBP18.92■□□□□ 0.62
LINC01238-205ENST00000567549 ATRXP46100 2492 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 SPTY2D1-AS1A0A0U1RR47 76 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 KRIT1O00522 736 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 FFAR2O15552 330 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 IGSF6O95976 241 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 HTR7P34969 479 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 THOP1P52888 689 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 JAM2P57087 298 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 YBEYP58557 167 aaPredicted RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 INO80DQ53TQ3 878 aaPredicted RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 SEL1L3Q68CR1 1132 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 ZCCHC8Q6NZY4 707 aaKnown RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 GCNT7Q6ZNI0 430 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 SLC25A45Q8N413 288 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 FAM181AQ8N9Y4 354 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 TPCN2Q8NHX9 752 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 SLC20A1Q8WUM9 679 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 CENPIQ92674 756 aaPredicted RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 FZD3Q9NPG1 666 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 SEPT11Q9NVA2 429 aaKnown RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 ZFR2Q9UPR6 939 aaKnown RBP18.91■□□□□ 0.62
LINC01238-205ENST00000567549 CA5BQ9Y2D0 317 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 WDFY3Q8IZQ1 3526 aa18.91■□□□□ 0.62
LINC01238-205ENST00000567549 CHD5Q8TDI0 1954 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 TDRD6O60522 2096 aaKnown RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 C16orf96A6NNT2 1141 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 KDELR3O43731 214 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 ZNF821O75541 412 aaPredicted RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 LRIG2O94898 1065 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 PAK4O96013 591 aaPredicted RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 MT-CO3P00414 261 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 NME1P15531 152 aaKnown RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 XPAP23025 273 aaPredicted RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 RPIAP49247 311 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 CLDN2P57739 230 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 C15orf59Q2T9L4 293 aaPredicted RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 PARP15Q460N3 678 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 TRNP1Q6NT89 227 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 DNAJC24Q6P3W2 148 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 PARS2Q7L3T8 475 aaKnown RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 NLRP14Q86W24 1093 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 PHF13Q86YI8 300 aaPredicted RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 SLC30A5Q8TAD4 765 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 SNIP1Q8TAD8 396 aaKnown RBP18.9■□□□□ 0.62
LINC01238-205ENST00000567549 FGF11Q92914 225 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 C1QTNF2Q9BXJ5 285 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 MYLKQ15746 1914 aa18.9■□□□□ 0.62
LINC01238-205ENST00000567549 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 EIF3CLB5ME19 914 aaKnown RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 TRIM38O00635 465 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 FGF10O15520 208 aaPredicted RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 BUB1O43683 1085 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 CSF2P04141 144 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 UNGP13051 313 aaPredicted RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 EPHB2P29323 1055 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 EIF2S3P41091 472 aaKnown RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 YPEL5P62699 121 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 INSM1Q01101 510 aaPredicted RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 MYL5Q02045 173 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 ELP6Q0PNE2 266 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 COL9A2Q14055 689 aaPredicted RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 MYLK3Q32MK0 819 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 MARCH9Q86YJ5 346 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms