RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 PRKD1Q15139 912 aaPredicted RBP20.6■□□□□ 0.89
RNF40-210ENST00000566811 CYTH1Q15438 398 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 ALG1LQ6GMV1 187 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 TSSK4Q6SA08 328 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 DPY19L3Q6ZPD9 716 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 QKIQ96PU8 341 aaKnown RBP eCLIP20.6■□□□□ 0.89
RNF40-210ENST00000566811 NAP1L3Q99457 506 aaPredicted RBP20.6■□□□□ 0.89
RNF40-210ENST00000566811 MGME1Q9BQP7 344 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 CPEB1Q9BZB8 566 aaKnown RBP20.6■□□□□ 0.89
RNF40-210ENST00000566811 TM6SF2Q9BZW4 377 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 TNKS2Q9H2K2 1166 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 HECAQ9UBI9 543 aaPredicted RBP20.6■□□□□ 0.89
RNF40-210ENST00000566811 PPM1HQ9ULR3 514 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 FZD4Q9ULV1 537 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 SLC7A4O43246 635 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 IL1BP01584 269 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 VAV1P15498 845 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 PECAM1P16284 738 aaPredicted RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 OTUD4Q01804 1114 aaKnown RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 ADCY2Q08462 1091 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 AP1B1Q10567 949 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 SLC45A4Q5BKX6 768 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 HEATR6Q6AI08 1181 aaKnown RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 NPNTQ6UXI9 565 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 SLC36A4Q6YBV0 504 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 LEKR1Q6ZMV7 388 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 SLC13A5Q86YT5 568 aaPredicted RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 MMAAQ8IVH4 418 aaKnown RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 CDKL3Q8IVW4 592 aaPredicted RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 PIP4K2CQ8TBX8 421 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 LGMNQ99538 433 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 POLR1EQ9GZS1 481 aaKnown RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 PABPC3Q9H361 631 aaKnown RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 ITM2CQ9NQX7 267 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 DYRK4Q9NR20 520 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 POLR3BQ9NW08 1133 aaPredicted RBP20.59■□□□□ 0.89
RNF40-210ENST00000566811 NCKAP1Q9Y2A7 1128 aa20.59■□□□□ 0.89
RNF40-210ENST00000566811 DCHS1Q96JQ0 3298 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.58■□□□□ 0.89
RNF40-210ENST00000566811 A0A1W2PQ67 120 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 BNIP3LO60238 219 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 LILRB5O75023 590 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 MAP3K6O95382 1288 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 TCP1P17987 556 aaKnown RBP20.58■□□□□ 0.89
RNF40-210ENST00000566811 P2RY2P41231 377 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 FNTBP49356 437 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 GNG11P61952 73 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 SLC10A7Q0GE19 358 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 MYLK3Q32MK0 819 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 NETO2Q8NC67 525 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 TSEN2Q8NCE0 465 aaKnown RBP20.58■□□□□ 0.89
RNF40-210ENST00000566811 ACTL9Q8TC94 416 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 HCAR2Q8TDS4 363 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 GAB3Q8WWW8 586 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 ZNF641Q96N77 438 aaPredicted RBP20.58■□□□□ 0.89
RNF40-210ENST00000566811 NUDCD1Q96RS6 583 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 MTG2Q9H4K7 406 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 ATP13A3Q9H7F0 1226 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 HOMER3Q9NSC5 361 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 TPX2Q9ULW0 747 aaKnown RBP20.58■□□□□ 0.89
RNF40-210ENST00000566811 ACTL7AQ9Y615 435 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 WASF2Q9Y6W5 498 aa20.58■□□□□ 0.89
RNF40-210ENST00000566811 EP300Q09472 2414 aaPredicted RBP20.58■□□□□ 0.88
RNF40-210ENST00000566811 CEP192Q8TEP8 1941 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 ENC1O14682 589 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 CA4P22748 312 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 ITGB7P26010 798 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 SERPINA4P29622 427 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 SLC8A1P32418 973 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 PSMD8P48556 350 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 SPDYCQ5MJ68 293 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 RYBPQ8N488 228 aaPredicted RBP20.57■□□□□ 0.88
RNF40-210ENST00000566811 IL12RB2Q99665 862 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 NAPGQ99747 312 aaPredicted RBP20.57■□□□□ 0.88
RNF40-210ENST00000566811 TPSD1Q9BZJ3 242 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 PCED1AQ9H1Q7 454 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 ZDHHC6Q9H6R6 413 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 SGK2Q9HBY8 427 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 TTC7AQ9ULT0 858 aaPredicted RBP20.57■□□□□ 0.88
RNF40-210ENST00000566811 SNX12Q9UMY4 172 aa20.57■□□□□ 0.88
RNF40-210ENST00000566811 BCLAF3A2AJT9 711 aaKnown RBP20.56■□□□□ 0.88
RNF40-210ENST00000566811 CTAGE9A4FU28 777 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 CFAP69A5D8W1 941 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 KRIT1O00522 736 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 SOCS5O75159 536 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 LEFTY1O75610 366 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 RPP40O75818 363 aaKnown RBP20.56■□□□□ 0.88
RNF40-210ENST00000566811 STK10O94804 968 aaKnown RBP20.56■□□□□ 0.88
RNF40-210ENST00000566811 RBP3P10745 1247 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 PRLRP16471 622 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 TPMTP51580 245 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 SUOXP51687 545 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 EIF3EP60228 445 aaKnown RBP20.56■□□□□ 0.88
RNF40-210ENST00000566811 LLGL1Q15334 1064 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 AADACL2Q6P093 401 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 SRLQ86TD4 932 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 ZSCAN30Q86W11 494 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 GRIN3AQ8TCU5 1115 aa20.56■□□□□ 0.88
RNF40-210ENST00000566811 HTR3CQ8WXA8 447 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms