RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CLDND1Q9NY35 253 aa17.94■□□□□ 0.46
HERC2-208ENST00000566635 BCCIPQ9P287 314 aaKnown RBP eCLIP17.94■□□□□ 0.46
HERC2-208ENST00000566635 RABGEF1Q9UJ41 708 aa17.94■□□□□ 0.46
HERC2-208ENST00000566635 FCF1Q9Y324 198 aaKnown RBP17.94■□□□□ 0.46
HERC2-208ENST00000566635 MTCH2Q9Y6C9 303 aa17.94■□□□□ 0.46
HERC2-208ENST00000566635 KIF26AQ9ULI4 1882 aaPredicted RBP17.94■□□□□ 0.46
HERC2-208ENST00000566635 TCRBV9S1A1TA0A576 114 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 HOXB8P17481 243 aaPredicted RBP17.93■□□□□ 0.46
HERC2-208ENST00000566635 RGS19P49795 217 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 CDH17Q12864 832 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 ADGRE1Q14246 886 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 STAT4Q14765 748 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 SKIDA1Q1XH10 827 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 DENND5AQ6IQ26 1287 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 LINC00523Q86TU6 105 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 BPIFB1Q8TDL5 484 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 OSCP1Q8WVF1 389 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 TADA1Q96BN2 335 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 OTUB2Q96DC9 234 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 C2orf49Q9BVC5 232 aaPredicted RBP17.93■□□□□ 0.46
HERC2-208ENST00000566635 S1PR5Q9H228 398 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 GDE1Q9NZC3 331 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 BPTFQ12830 3046 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 TRIOBPQ9H2D6 2365 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 HEPACAM2A8MVW5 462 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 K7ERQ8 282 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 SLC9A3R1O14745 358 aaPredicted RBP17.93■□□□□ 0.46
HERC2-208ENST00000566635 TRIM24O15164 1050 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 ATP9BO43861 1147 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 CYP17A1P05093 508 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 TSHRP16473 764 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 GCAP28676 217 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 EML3Q32P44 896 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 LRIT3Q3SXY7 679 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 FUT11Q495W5 492 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 PITRM1Q5JRX3 1037 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 SLC25A41Q8N5S1 370 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 NAT16Q8N8M0 369 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 MRRFQ96E11 262 aaKnown RBP17.93■□□□□ 0.46
HERC2-208ENST00000566635 ATP6V1G3Q96LB4 118 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 MYADMQ96S97 322 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 MARK1Q9P0L2 795 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 CDH7Q9ULB5 785 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 DENND4AQ7Z401 1863 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 COL4A3Q01955 1670 aa17.93■□□□□ 0.46
HERC2-208ENST00000566635 POC1B-GALNT4F8VUJ3 575 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 ARSAP15289 507 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 CTSOP43234 321 aaPredicted RBP17.92■□□□□ 0.46
HERC2-208ENST00000566635 DHCR24Q15392 516 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 CES3Q6UWW8 571 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 ACSS3Q9H6R3 686 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 NOD2Q9HC29 1040 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 VPS45Q9NRW7 570 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 BFARQ9NZS9 450 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 LMCD1Q9NZU5 365 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 LHX3Q9UBR4 397 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 POLR3GO15318 223 aaPredicted RBP17.92■□□□□ 0.46
HERC2-208ENST00000566635 PGAM1P18669 254 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 CR2P20023 1033 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 SCNN1BP51168 640 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 ATAT1Q5SQI0 421 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 TANGO2Q6ICL3 276 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 TRMT10BQ6PF06 316 aaKnown RBP17.92■□□□□ 0.46
HERC2-208ENST00000566635 RANBP10Q6VN20 620 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 CCDC77Q9BR77 488 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 ROPN1BQ9BZX4 212 aaPredicted RBP17.92■□□□□ 0.46
HERC2-208ENST00000566635 ROPN1Q9HAT0 212 aaPredicted RBP17.92■□□□□ 0.46
HERC2-208ENST00000566635 VPS18Q9P253 973 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 GGA2Q9UJY4 613 aa17.92■□□□□ 0.46
HERC2-208ENST00000566635 SMAD6O43541 496 aaKnown RBP17.91■□□□□ 0.46
HERC2-208ENST00000566635 SPAG6O75602 509 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 TCEA3O75764 348 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 C1QAP02745 245 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 IVLP07476 585 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 LTBRP36941 435 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 SERPINH1P50454 418 aaKnown RBP17.91■□□□□ 0.46
HERC2-208ENST00000566635 CRYMQ14894 314 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 SMAD1Q15797 465 aaKnown RBP17.91■□□□□ 0.46
HERC2-208ENST00000566635 STEAP4Q687X5 459 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 CES5AQ6NT32 575 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 UNC5BQ8IZJ1 945 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 MICALL1Q8N3F8 863 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 EBF3Q9H4W6 596 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 SAMD15Q9P1V8 674 aa17.91■□□□□ 0.46
HERC2-208ENST00000566635 RGS16O15492 202 aaPredicted RBP17.9■□□□□ 0.46
HERC2-208ENST00000566635 PABPC1P11940 636 aaKnown RBP17.9■□□□□ 0.46
HERC2-208ENST00000566635 STK19P49842 368 aaPredicted RBP17.9■□□□□ 0.46
HERC2-208ENST00000566635 PLK1P53350 603 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 GYS2P54840 703 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 KBTBD12Q3ZCT8 623 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 INO80DQ53TQ3 878 aaPredicted RBP17.9■□□□□ 0.46
HERC2-208ENST00000566635 ATXN7L2Q5T6C5 722 aaPredicted RBP17.9■□□□□ 0.46
HERC2-208ENST00000566635 RETSATQ6NUM9 610 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 VITQ6UXI7 678 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 GSDMBQ8TAX9 411 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 ACDQ96AP0 544 aa17.9■□□□□ 0.46
HERC2-208ENST00000566635 RPL10LQ96L21 214 aaKnown RBP17.9■□□□□ 0.46
HERC2-208ENST00000566635 TRPV4Q9HBA0 871 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms