RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 DNPEPQ9ULA0 475 aa8.29□□□□□ -1.08
CDH13-208ENST00000566333 GVINP1Q7Z2Y8 2422 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 KNL1Q8NG31 2342 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 TTC24A2A3L6 582 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 BCLAF3A2AJT9 711 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 CTAGE9A4FU28 777 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 HACD1B0YJ81 288 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 PGRMC1O00264 195 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 INSIG1O15503 277 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 LAMTOR5O43504 91 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 SYNCRIPO60506 623 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 IGSF6O95976 241 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 IGLV3-19P01714 112 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 MMP2P08253 660 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CCNB1P14635 433 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 PRLRP16471 622 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 TCP1P17987 556 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 RBL1P28749 1068 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 DRD3P35462 400 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 HSPA9P38646 679 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 PSMD8P48556 350 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 PXNP49023 591 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 GDF10P55107 478 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 EIF3EP60228 445 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 MAXP61244 160 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 RPS14P62263 151 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 AP1B1Q10567 949 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ANGPT1Q15389 498 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CST6Q15828 149 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ACCSLQ4AC99 568 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CARD16Q5EG05 197 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CCDC181Q5TID7 509 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ZNF776Q68DI1 518 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 SDE2Q6IQ49 451 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CREG2Q8IUH2 290 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CDKL3Q8IVW4 592 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 CAMKK1Q8N5S9 505 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 AADATQ8N5Z0 425 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 TTC13Q8NBP0 860 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 CCNYQ8ND76 341 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 PRSS33Q8NF86 280 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ARRDC2Q8TBH0 407 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ACTRT1Q8TDG2 376 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 TFB1MQ8WVM0 346 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 HTR3CQ8WXA8 447 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 OR8D1Q8WZ84 308 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ARRDC3Q96B67 414 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 RTP4Q96DX8 246 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 GORASP1Q9BQQ3 440 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 TPSD1Q9BZJ3 242 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ZDHHC6Q9H6R6 413 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 USP29Q9HBJ7 922 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 POLMQ9NP87 494 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 NT5MQ9NPB1 228 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 USP36Q9P275 1121 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 EBF1Q9UH73 591 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 SUN2Q9UH99 717 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 IL36AQ9UHA7 158 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 EVLQ9UI08 416 aaPredicted RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 FBXO4Q9UKT5 387 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 PPM1HQ9ULR3 514 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 SLC8A2Q9UPR5 921 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 ATP8A1Q9Y2Q0 1164 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 RALGAPA1Q6GYQ0 2036 aa8.28□□□□□ -1.08
CDH13-208ENST00000566333 RIF1Q5UIP0 2472 aaKnown RBP8.28□□□□□ -1.08
CDH13-208ENST00000566333 EP300Q09472 2414 aaPredicted RBP8.27□□□□□ -1.09
CDH13-208ENST00000566333 CCDC163A0A0D9SF12 145 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 TSPAN11A1L157 253 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 C10orf142B7Z368 130 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 H7C0C1 242 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 PDE2AO00408 941 aaPredicted RBP8.27□□□□□ -1.09
CDH13-208ENST00000566333 PLK4O00444 970 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 MID1O15344 667 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 SPINT1O43278 529 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 BNIP3LO60238 219 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 LEFTY1O75610 366 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 PIGNO95427 931 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 ADH1BP00325 375 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 JCHAINP01591 159 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 CHRNA3P32297 505 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 ATP5OP48047 213 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 CSNK1DP48730 415 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 RENBPP51606 427 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 NUBP1P53384 320 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 AP1S1P61966 158 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 SNRPD1P62314 119 aaKnown RBP8.27□□□□□ -1.09
CDH13-208ENST00000566333 DSC2Q02487 901 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 CSTF1Q05048 431 aaKnown RBP8.27□□□□□ -1.09
CDH13-208ENST00000566333 NSUN2Q08J23 767 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDH13-208ENST00000566333 NIPAL4Q0D2K0 466 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 TCF15Q12870 199 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 CYP1B1Q16678 543 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 LONRF2Q1L5Z9 754 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 ZNF528Q3MIS6 628 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 POM121L1PQ3SYA9 428 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 MARC1Q5VT66 337 aa8.27□□□□□ -1.09
CDH13-208ENST00000566333 AGBL4Q5VU57 503 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms