RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 GPR153Q6NV75 609 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 KIAA0907Q7Z7F0 614 aaPredicted RBP31.01■■■□□ 2.55
CTCF-203ENST00000566078 ETFBKMTQ8IXQ9 262 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 OR52K1Q8NGK4 314 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 TBL1YQ9BQ87 522 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 APOL2Q9BQE5 337 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 PIH1D1Q9NWS0 290 aaKnown RBP31.01■■■□□ 2.55
CTCF-203ENST00000566078 LHX3Q9UBR4 397 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 SLC25A13Q9UJS0 675 aa31.01■■■□□ 2.55
CTCF-203ENST00000566078 K7ERQ8 282 aa31■■■□□ 2.55
CTCF-203ENST00000566078 MAP2K7O14733 419 aa31■■■□□ 2.55
CTCF-203ENST00000566078 ALOX15BO15296 676 aa31■■■□□ 2.55
CTCF-203ENST00000566078 CISD3P0C7P0 127 aa31■■■□□ 2.55
CTCF-203ENST00000566078 RHOAP61586 193 aa31■■■□□ 2.55
CTCF-203ENST00000566078 SKOR1P84550 965 aa31■■■□□ 2.55
CTCF-203ENST00000566078 NR1H3Q13133 447 aa31■■■□□ 2.55
CTCF-203ENST00000566078 PCSK7Q16549 785 aa31■■■□□ 2.55
CTCF-203ENST00000566078 GEN1Q17RS7 908 aa31■■■□□ 2.55
CTCF-203ENST00000566078 KDELC1Q6UW63 502 aa31■■■□□ 2.55
CTCF-203ENST00000566078 ADIPOR2Q86V24 386 aa31■■■□□ 2.55
CTCF-203ENST00000566078 TTC8Q8TAM2 541 aa31■■■□□ 2.55
CTCF-203ENST00000566078 WDR83Q9BRX9 315 aaKnown RBP31■■■□□ 2.55
CTCF-203ENST00000566078 FICDQ9BVA6 458 aa31■■■□□ 2.55
CTCF-203ENST00000566078 TRMT61BQ9BVS5 477 aaKnown RBP31■■■□□ 2.55
CTCF-203ENST00000566078 FSD1LQ9BXM9 530 aa31■■■□□ 2.55
CTCF-203ENST00000566078 EPB41L4BQ9H329 900 aa31■■■□□ 2.55
CTCF-203ENST00000566078 VPS45Q9NRW7 570 aa31■■■□□ 2.55
CTCF-203ENST00000566078 STK19P49842 368 aaPredicted RBP30.99■■■□□ 2.55
CTCF-203ENST00000566078 KYNUQ16719 465 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 CFAP58Q5T655 872 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 MBLAC2Q68D91 279 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 LINC00523Q86TU6 105 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 RNF135Q8IUD6 432 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 AGGF1Q8N302 714 aaeCLIP30.99■■■□□ 2.55
CTCF-203ENST00000566078 ATP11CQ8NB49 1132 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 FBXO36Q8NEA4 188 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 RPL10LQ96L21 214 aaKnown RBP30.99■■■□□ 2.55
CTCF-203ENST00000566078 MRGPRX2Q96LB1 330 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 VIPAS39Q9H9C1 493 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 SCUBE2Q9NQ36 999 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 GTSE1Q9NYZ3 720 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 CHMP2BQ9UQN3 213 aa30.99■■■□□ 2.55
CTCF-203ENST00000566078 CXorf51AA0A1B0GTR3 108 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 RIPK2O43353 540 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 ATP8B1O43520 1251 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SMAD6O43541 496 aaKnown RBP30.98■■■□□ 2.55
CTCF-203ENST00000566078 ACSL3O95573 720 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 ELK3P41970 407 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SCNN1BP51168 640 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 WNT3AP56704 352 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SULT2A1Q06520 285 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SLC20A2Q08357 652 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 IHHQ14623 411 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 METTL3Q86U44 580 aaKnown RBP30.98■■■□□ 2.55
CTCF-203ENST00000566078 PYROXD1Q8WU10 500 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 TADA1Q96BN2 335 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 CASS4Q9NQ75 786 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 DYNC1LI1Q9Y6G9 523 aaKnown RBP30.98■■■□□ 2.55
CTCF-203ENST00000566078 ANHXE9PGG2 379 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 TTC4O95801 387 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 AGTP01019 485 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 POLR2EP19388 210 aaKnown RBP30.98■■■□□ 2.55
CTCF-203ENST00000566078 CR2P20023 1033 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SLC6A11P48066 632 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SESN2P58004 480 aaPredicted RBP30.98■■■□□ 2.55
CTCF-203ENST00000566078 CBLBQ13191 982 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 TMEM215Q68D42 235 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 DENND2CQ68D51 928 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 DEFB123Q8N688 67 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 DNAAF3Q8N9W5 541 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 WFIKKN2Q8TEU8 576 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 TTC25Q96NG3 672 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 NUDCD1Q96RS6 583 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 SLC27A6Q9Y2P4 619 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 TEX264Q9Y6I9 313 aa30.98■■■□□ 2.55
CTCF-203ENST00000566078 MUC22E2RYF6 1773 aaPredicted RBP30.98■■■□□ 2.55
CTCF-203ENST00000566078 COL4A2P08572 1712 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 INSIG1O15503 277 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 SERPINF2P08697 491 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 ADRA1AP35348 466 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 ECT2LQ008S8 904 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 CCDC38Q502W7 563 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 GRAMD4Q6IC98 578 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 MPP5Q8N3R9 675 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 NOD2Q9HC29 1040 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 PLAAQ9Y263 795 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 HS3ST2Q9Y278 367 aa30.97■■■□□ 2.55
CTCF-203ENST00000566078 C2CD4DB7Z1M9 353 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 SRCP12931 536 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 KDSRQ06136 332 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 KDELC2Q7Z4H8 507 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 IGDCC3Q8IVU1 814 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 TTC17Q96AE7 1141 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 DEC1Q9P2X7 70 aa30.96■■■□□ 2.55
CTCF-203ENST00000566078 CPP00450 1065 aa30.95■■■□□ 2.55
CTCF-203ENST00000566078 MGAT1P26572 445 aa30.95■■■□□ 2.55
CTCF-203ENST00000566078 GJA4P35212 333 aa30.95■■■□□ 2.55
CTCF-203ENST00000566078 CDH17Q12864 832 aa30.95■■■□□ 2.55
CTCF-203ENST00000566078 SLC29A2Q14542 456 aa30.95■■■□□ 2.55
CTCF-203ENST00000566078 ATXN7L2Q5T6C5 722 aaPredicted RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms