RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 NAPEPLDQ6IQ20 393 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 ERN2Q76MJ5 926 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 CHCHD4Q8N4Q1 142 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 TC2NQ8N9U0 490 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 TRIM11Q96F44 468 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 PPP1R16AQ96I34 528 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 CELF6Q96J87 481 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 KCTD15Q96SI1 283 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 SCNM1Q9BWG6 230 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 NOL6Q9H6R4 1146 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 RALYQ9UKM9 306 aaKnown RBP13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 PCOLCE2Q9UKZ9 415 aa13.87□□□□□ -0.19
VPS9D1-204ENST00000565023 TMEM191CA6NGB0 347 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 LATO43561 262 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 KDELR3O43731 214 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 PRPSAP2O60256 369 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 TMCC1O94876 653 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 UGT2B4P06133 528 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 MYBL1P10243 752 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 MIPP30301 263 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 NEK3P51956 506 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 GEMIN4P57678 1058 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 SNRPD1P62314 119 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 CCDC15Q0P6D6 951 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 STAT4Q14765 748 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 SUZ12Q15022 739 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 SETMARQ53H47 684 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 PPP6R3Q5H9R7 873 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 ERMARDQ5T6L9 678 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 SEL1L3Q68CR1 1132 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 ALKBH5Q6P6C2 394 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 FBXL19Q6PCT2 694 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 PARS2Q7L3T8 475 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 ARFGAP1Q8N6T3 406 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 FAM131CQ96AQ9 280 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 EXOC2Q96KP1 924 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 CHP1Q99653 195 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 KDM4CQ9H3R0 1056 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 PREBQ9HCU5 417 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 GDF3Q9NR23 364 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 SCINQ9Y6U3 715 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
VPS9D1-204ENST00000565023 A0A1W2PR77 199 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 TLR4O00206 839 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 FLRT2O43155 660 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 FTH1P19P0C7X4 201 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 ZNF883P0CG24 379 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 ADRB3P13945 408 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 AIF1P55008 147 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 RHOAP61586 193 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 SLC18A3Q16572 532 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 SMTNL2Q2TAL5 461 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 CCDC122Q5T0U0 273 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 TRIM69Q86WT6 500 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 HORMAD1Q86X24 394 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 OR2AP1Q8NGE2 309 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 HSPH1Q92598 858 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 KLHL32Q96NJ5 620 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 ELF4Q99607 663 aaPredicted RBP13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 THAP2Q9H0W7 228 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 RETREG1Q9H6L5 497 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 ZWILCHQ9H900 591 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 MRPL47Q9HD33 250 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 KLK13Q9UKR3 277 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 ZFR2Q9UPR6 939 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 ITM2BQ9Y287 266 aa13.85□□□□□ -0.19
VPS9D1-204ENST00000565023 SHROOM3Q8TF72 1996 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 A0A1B0GTQ1 180 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 PRAMEF26H0Y7S4 382 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 DFFAO00273 331 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 NEMP1O14524 444 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 FGF10O15520 208 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 LRCH4O75427 683 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 GSRP00390 522 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 ITGAVP06756 1048 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 TCF4P15884 667 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 ITGB7P26010 798 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 CDC25BP30305 580 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 GJC1P36383 396 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 ABL2P42684 1182 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 SSR1P43307 286 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 CLDN2P57739 230 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 NXPH1P58417 271 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 YBEYP58557 167 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 HNRNPDQ14103 355 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 MYLK3Q32MK0 819 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 FNIP1Q8TF40 1166 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 ISG20Q96AZ6 181 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 GDAP1L1Q96MZ0 367 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 CALN1Q9BXU9 219 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 HDAC8Q9BY41 377 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 SLC39A8Q9C0K1 460 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 DEF6Q9H4E7 631 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 NHEJ1Q9H9Q4 299 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 GGT7Q9UJ14 662 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms