RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	GAN	Q9H2C0	597 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	PIH1D3	Q9NQM4	214 aa	Known RBP	5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	GPRC5D	Q9NZD1	345 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	IGSF9	Q9P2J2	1179 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	HECA	Q9UBI9	543 aa	Predicted RBP	5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	TAGLN3	Q9UI15	199 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	GNPTG	Q9UJJ9	305 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	ANAPC5	Q9UJX4	755 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	ASAP1	Q9ULH1	1129 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	G3BP2	Q9UN86	482 aa	Known RBP	5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	DNM3	Q9UQ16	869 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	NAALADL1	Q9UQQ1	740 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	MYRF	Q9Y2G1	1151 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	IKBKG	Q9Y6K9	419 aa		5.74	□□□□□ -1.49
CHD9-210	ENST00000564582	ZMYM2	Q9UBW7	1377 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	IQANK1	A0A1B0GTG1	560 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	EXOC1L	A0A1B0GW35	172 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582		A8MUI8	341 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	CENPBD1	B2RD01	187 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582		H0Y3Z8	333 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KPNA4	O00629	521 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SLC22A2	O15244	555 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SLC22A1	O15245	554 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	TLR2	O60603	784 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KATNA1	O75449	491 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ITGA10	O75578	1167 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	PDE8B	O95263	885 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KRT6A	P02538	564 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	A1BG	P04217	495 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KRT6B	P04259	564 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ALDH2	P05091	517 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	MYBL1	P10243	752 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KRT5	P13647	590 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	OSM	P13725	252 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ALOX15	P16050	662 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	AGXT	P21549	392 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	CA4	P22748	312 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ACRV1	P26436	265 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	RPL21	P46778	160 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KRT6C	P48668	564 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SNRPF	P62306	86 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	MRPL49	Q13405	166 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	THOC5	Q13769	683 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	BTG3	Q14201	252 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	LPIN1	Q14693	890 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KIF22	Q14807	665 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	PDK3	Q15120	406 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	DLGAP5	Q15398	846 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	CNGA3	Q16281	694 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	MST1L	Q2TV78	715 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	HYI	Q5T013	277 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	C1orf146	Q5VVC0	180 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	NEPRO	Q6NW34	567 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	RHBDF2	Q6PJF5	856 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	FAM83A	Q86UY5	434 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	DZIP1	Q86YF9	867 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SLC13A5	Q86YT5	568 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	IQCF2	Q8IXL9	164 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ANKRD42	Q8N9B4	389 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	FAM133A	Q8N9E0	248 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SLC35G2	Q8TBE7	412 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	HM13	Q8TCT9	377 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	UCMA	Q8WVF2	138 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	RASSF5	Q8WWW0	418 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	RAPGEF4	Q8WZA2	1011 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ST8SIA2	Q92186	375 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	RAD54L	Q92698	747 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ABTB1	Q969K4	478 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SKA1	Q96BD8	255 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SH3GL1	Q99961	368 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ZSWIM1	Q9BR11	485 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	YTHDF1	Q9BYJ9	559 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	KRTAP4-7	Q9BYR0	210 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	TRIM8	Q9BZR9	551 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	ENKD1	Q9H0I2	346 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	MRPL46	Q9H2W6	279 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	CDC42EP4	Q9H3Q1	356 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	TRABD	Q9H4I3	376 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	DHX33	Q9H6R0	707 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	MANSC1	Q9H8J5	431 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	S100A14	Q9HCY8	104 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	DIABLO	Q9NR28	239 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	GID8	Q9NWU2	228 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	BARHL2	Q9NY43	387 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	RRN3	Q9NYV6	651 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SMARCAL1	Q9NZC9	954 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	TMEM9	Q9P0T7	183 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	TFR2	Q9UP52	801 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	CLCA2	Q9UQC9	943 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	CARD8	Q9Y2G2	431 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	FAM32A	Q9Y421	112 aa	Known RBP	5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	SPEF1	Q9Y4P9	236 aa		5.73	□□□□□ -1.49
CHD9-210	ENST00000564582	PCDHA3	Q9Y5H8	950 aa		5.73	□□□□□ -1.49

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