RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 HNRNPA1L2Q32P51 320 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 DPY19L3Q6ZPD9 716 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 KDM1BQ8NB78 822 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 FLCNQ8NFG4 579 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 OR2A12Q8NGT7 310 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 SPATA22Q8NHS9 363 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 ARRDC2Q8TBH0 407 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 ISG20Q96AZ6 181 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 HINFPQ9BQA5 517 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 LRRC1Q9BTT6 524 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 POLR1EQ9GZS1 481 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 TRHDEQ9UKU6 1024 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 GAS8O95995 478 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 CR2P20023 1033 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 NTSR1P30989 418 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 MRPS21P82921 87 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 CARD16Q5EG05 197 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 SYCP2LQ5T4T6 812 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 METTL3Q86U44 580 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 MMGT1Q8N4V1 131 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 PJA1Q8NG27 643 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 OR2AP1Q8NGE2 309 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 GBA3Q9H227 469 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 NOD2Q9HC29 1040 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 PCDH9Q9HC56 1237 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 UBP1Q9NZI7 540 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 SLC8A2Q9UPR5 921 aa27.38■■□□□ 1.97
SH3GL3-205ENST00000563901 IGSF6O95976 241 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 MMP2P08253 660 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 CCNHP51946 323 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 DHX34Q14147 1143 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 GAS6Q14393 721 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 C9orf64Q5T6V5 341 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 KIAA1211LQ6NV74 962 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 VOPP1Q96AW1 172 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 GDAP1L1Q96MZ0 367 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 RUNDC3BQ96NL0 473 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 RBM15Q96T37 977 aaKnown RBP eCLIP27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 C2orf42Q9NWW7 574 aa27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 HECAQ9UBI9 543 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-205ENST00000563901 EDDM13A0A1B0GTR0 161 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 RIOK3O14730 519 aaKnown RBP27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 MT-CYBP00156 380 aaPredicted RBP27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 GSRP00390 522 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 COL9A1P20849 921 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 CD86P42081 329 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 SNRPD1P62314 119 aaKnown RBP27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 SLC7A5Q01650 507 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 PTK6Q13882 451 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 LRRC32Q14392 662 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 C8orf74Q6P047 294 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 TRIM67Q6ZTA4 783 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 SRLQ86TD4 932 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 STK40Q8N2I9 435 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 CCDC26Q8TAB7 109 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 KCNV2Q8TDN2 545 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 MFSD1Q9H3U5 465 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 SCUBE2Q9NQ36 999 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 PRSS16Q9NQE7 514 aa27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 FEZ2Q9UHY8 353 aaPredicted RBP27.36■■□□□ 1.97
SH3GL3-205ENST00000563901 ACTN2P35609 894 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 HSPA9P38646 679 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 GPS1Q13098 491 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 CWF19L1Q69YN2 538 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 ALG1LQ6GMV1 187 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 PRPF39Q86UA1 669 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 GRIN3AQ8TCU5 1115 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 IMP4Q96G21 291 aaKnown RBP27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 OXNAD1Q96HP4 312 aaPredicted RBP27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 NUDCD1Q96RS6 583 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 GABRG3Q99928 467 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 TRIM31Q9BZY9 425 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 ZDHHC6Q9H6R6 413 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 PAK5Q9P286 719 aa27.35■■□□□ 1.97
SH3GL3-205ENST00000563901 ZNF189O75820 626 aaPredicted RBP27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 PIGNO95427 931 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 DCNP07585 359 aaKnown RBP27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 HOXB2P14652 356 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 NSUN2Q08J23 767 aaKnown RBP eCLIP27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 ITPRIPL1Q6GPH6 555 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 NELL2Q99435 816 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 SLC25A51Q9H1U9 297 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 ETNK1Q9HBU6 452 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 ASIC3Q9UHC3 531 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 NPC1O15118 1278 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 CTSLP07711 333 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 RECQLP46063 649 aaPredicted RBP27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 SKOR1P84550 965 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 MYLK3Q32MK0 819 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 SDE2Q6IQ49 451 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 NCEH1Q6PIU2 408 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 CACUL1Q86Y37 369 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 FCRL5Q96RD9 977 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 MLPHQ9BV36 600 aaPredicted RBP27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 RAB6BQ9NRW1 208 aa27.34■■□□□ 1.97
SH3GL3-205ENST00000563901 A0A1W2PQF6 199 aa27.33■■□□□ 1.97
SH3GL3-205ENST00000563901 SLU7O95391 586 aaKnown RBP27.33■■□□□ 1.97
SH3GL3-205ENST00000563901 TMEM92Q6UXU6 159 aa27.33■■□□□ 1.97
SH3GL3-205ENST00000563901 TRMT11Q7Z4G4 463 aaKnown RBP27.33■■□□□ 1.97
SH3GL3-205ENST00000563901 MAATS1Q7Z4T9 603 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms