RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 TMCC1O94876 653 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 KRT7P08729 469 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 ITGB7P26010 798 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 MAN1A1P33908 653 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 ARHGAP25P42331 645 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 PAPOLAP51003 745 aaKnown RBP13.61□□□□□ -0.23
CLK3-213ENST00000563842 ZNF75DP51815 510 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 NEK3P51956 506 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 SLC25A11Q02978 314 aaKnown RBP13.61□□□□□ -0.23
CLK3-213ENST00000563842 GRIK2Q13002 908 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 SLC14A1Q13336 389 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 DPYSQ14117 519 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 MYLK3Q32MK0 819 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 FBXL19Q6PCT2 694 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 TMCO3Q6UWJ1 677 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 TRIM69Q86WT6 500 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 CCDC170Q8IYT3 715 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 RAB7BQ96AH8 199 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 ARRDC3Q96B67 414 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 CELF6Q96J87 481 aaKnown RBP13.61□□□□□ -0.23
CLK3-213ENST00000563842 PACSIN1Q9BY11 444 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 SP110Q9HB58 689 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 DNAAF2Q9NVR5 837 aaKnown RBP13.61□□□□□ -0.23
CLK3-213ENST00000563842 DMTF1Q9Y222 760 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
CLK3-213ENST00000563842 UPK3BL1B0FP48 263 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 UPK3BL2E5RIL1 263 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 DFFAO00273 331 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 PLK4O00444 970 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 KRIT1O00522 736 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 LATO43561 262 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 DFNA5O60443 496 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 CYLC1P35663 651 aaPredicted RBP13.6□□□□□ -0.23
CLK3-213ENST00000563842 CSNK1EP49674 416 aaKnown RBP13.6□□□□□ -0.23
CLK3-213ENST00000563842 METAP1P53582 386 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 CDH6P55285 790 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 C21orf59P57076 290 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 IL10RBQ08334 325 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 RFTN1Q14699 578 aaPredicted RBP13.6□□□□□ -0.23
CLK3-213ENST00000563842 PDK2Q15119 407 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 SETMARQ53H47 684 aaPredicted RBP13.6□□□□□ -0.23
CLK3-213ENST00000563842 ZNF805Q5CZA5 627 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 PIP5KL1Q5T9C9 394 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 TMCO4Q5TGY1 634 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 LEKR1Q6ZMV7 388 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 SLC35G2Q8TBE7 412 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 RFFLQ8WZ73 363 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 CSPG4P5Q96PW8 444 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 KLC2Q9H0B6 622 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 SLC32A1Q9H598 525 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 AASDHPPTQ9NRN7 309 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 MFHAS1Q9Y4C4 1052 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
CLK3-213ENST00000563842 A0A1B0GVT2 93 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 C10orf142B7Z368 130 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 VILLO15195 856 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 AP1G1O43747 822 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 RNGTTO60942 597 aaKnown RBP13.59□□□□□ -0.23
CLK3-213ENST00000563842 PALMO75781 387 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 MTA2O94776 668 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 PCDH8O95206 1070 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 ZNF883P0CG24 379 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 ADRB3P13945 408 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 TCF4P15884 667 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 CSRP1P21291 193 aaKnown RBP13.59□□□□□ -0.23
CLK3-213ENST00000563842 AMPD1P23109 780 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 CD38P28907 300 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 RENBPP51606 427 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 HNRNPDQ14103 355 aaKnown RBP13.59□□□□□ -0.23
CLK3-213ENST00000563842 MESDQ14696 234 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 SPA17Q15506 151 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 PPM1JQ5JR12 505 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 ZFYVE27Q5T4F4 411 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 GDPD4Q6W3E5 623 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 LRRC49Q8IUZ0 686 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 BBS5Q8N3I7 341 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 KCTD6Q8NC69 237 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 FAM71BQ8TC56 605 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 NSMCE1Q8WV22 266 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 FEM1CQ96JP0 617 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 SERAC1Q96JX3 654 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 ZNF599Q96NL3 588 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 PANX2Q96RD6 677 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 ORAI3Q9BRQ5 295 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 CPEB1Q9BZB8 566 aaKnown RBP13.59□□□□□ -0.23
CLK3-213ENST00000563842 PDFQ9HBH1 243 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 FSCN3Q9NQT6 498 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 IPO11Q9UI26 975 aaKnown RBP13.59□□□□□ -0.23
CLK3-213ENST00000563842 ANKRD6Q9Y2G4 727 aa13.59□□□□□ -0.23
CLK3-213ENST00000563842 TDRD6O60522 2096 aaKnown RBP13.59□□□□□ -0.23
CLK3-213ENST00000563842 C16orf96A6NNT2 1141 aa13.58□□□□□ -0.24
CLK3-213ENST00000563842 PRAMEF26H0Y7S4 382 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms