RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TTC17Q96AE7 1141 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 EXOC2Q96KP1 924 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 RPL10LQ96L21 214 aaKnown RBP10.31□□□□□ -0.76
SMG1-208ENST00000563448 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 WDR83Q9BRX9 315 aaKnown RBP10.31□□□□□ -0.76
SMG1-208ENST00000563448 FUT8Q9BYC5 575 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 FRMD8Q9BZ67 464 aaPredicted RBP10.31□□□□□ -0.76
SMG1-208ENST00000563448 PHACTR1Q9C0D0 580 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 EPB41L4BQ9H329 900 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 SEMA4AQ9H3S1 761 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 LRRC40Q9H9A6 602 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 SLC27A6Q9Y2P4 619 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 CXorf51AA0A1B0GTR3 108 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 GOLGA6CA6NDK9 693 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 GOLGA6BA6NDN3 693 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 ALOX15BO15296 676 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 EIF3HO15372 352 aaKnown RBP eCLIP10.31□□□□□ -0.764e-7■■■□□ 17.7
SMG1-208ENST00000563448 PMPCBO75439 489 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 SASH3O75995 380 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 AGTP01019 485 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 GOLGA6DP0CG33 693 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 MLNP12872 115 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 SRCP12931 536 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 GJA4P35212 333 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 ADRA1AP35348 466 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 HSD17B3P37058 310 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 OPRD1P41143 372 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 MAGEA4P43358 317 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 GEMIN4P57678 1058 aaKnown RBP10.31□□□□□ -0.76
SMG1-208ENST00000563448 NR1H3Q13133 447 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 MPP3Q13368 585 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 BBS9Q3SYG4 887 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 RNF135Q8IUD6 432 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 PDIK1LQ8N165 341 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 OR52K1Q8NGK4 314 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 HLA-CQ95604 372 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 CHFRQ96EP1 664 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 PPP1R2P1Q96PQ5 205 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 APOL2Q9BQE5 337 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 CASS4Q9NQ75 786 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 GOLGA6AQ9NYA3 693 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 NINJ2Q9NZG7 142 aa10.31□□□□□ -0.76
SMG1-208ENST00000563448 SCN8AQ9UQD0 1980 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 MAP2K7O14733 419 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 INSIG1O15503 277 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 ZNF821O75541 412 aaPredicted RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 POLR2EP19388 210 aaKnown RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 SCNN1BP51168 640 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 RHOAP61586 193 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 SARNPP82979 210 aaKnown RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 ECT2LQ008S8 904 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 KDSRQ06136 332 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 SULT2A1Q06520 285 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 SLC20A2Q08357 652 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 NSUN2Q08J23 767 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMG1-208ENST00000563448 PCSK7Q16549 785 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 AAK1Q2M2I8 961 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 NAIF1Q69YI7 327 aaPredicted RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 NAPEPLDQ6IQ20 393 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 CEP128Q6ZU80 1094 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 HDXQ7Z353 690 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 ANKMY2Q8IV38 441 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 IGDCC3Q8IVU1 814 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 ZBED8Q8IZ13 594 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 MPP5Q8N3R9 675 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 PHTF2Q8N3S3 785 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 SH2D3CQ8N5H7 860 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 ATP11CQ8NB49 1132 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 IPMKQ8NFU5 416 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 WFIKKN2Q8TEU8 576 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 UBLCP1Q8WVY7 318 aaPredicted RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 SIGLEC10Q96LC7 697 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 C9orf72Q96LT7 481 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 NUDCD1Q96RS6 583 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 TBL1YQ9BQ87 522 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 FICDQ9BVA6 458 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 XAB2Q9HCS7 855 aaKnown RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 HAUS2Q9NVX0 235 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 PIH1D1Q9NWS0 290 aaKnown RBP10.3□□□□□ -0.76
SMG1-208ENST00000563448 SLC25A13Q9UJS0 675 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 ERVW-1Q9UQF0 538 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 HS3ST2Q9Y278 367 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 TEX264Q9Y6I9 313 aa10.3□□□□□ -0.76
SMG1-208ENST00000563448 ELK3P41970 407 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 WNT3AP56704 352 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 SMAD2Q15796 467 aaKnown RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 KYNUQ16719 465 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 DGKKQ5KSL6 1271 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 SPDYCQ5MJ68 293 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 ATXN7L2Q5T6C5 722 aaPredicted RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 GRAMD4Q6IC98 578 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 DENND5AQ6IQ26 1287 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 NCEH1Q6PIU2 408 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 RANBP10Q6VN20 620 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 TRMT10CQ7L0Y3 403 aaKnown RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 FBXO36Q8NEA4 188 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 CYB5D2Q8WUJ1 264 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 SORCS1Q8WY21 1168 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms