RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RAB21Q9UL25 225 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 CNTN6Q9UQ52 1028 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 ECM29Q5VYK3 1845 aa5.38□□□□□ -1.55
LINC00254-201ENST00000563416 hCG_1642624A0A1W2PR95 340 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 M0QYT0 321 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 DDX58O95786 925 aaKnown RBP5.37□□□□□ -1.55
LINC00254-201ENST00000563416 CYP3A4P08684 503 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 RFPL3SP0C7P2 107 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 IGFBP2P18065 325 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 BDNFP23560 247 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 PDIA3P30101 505 aaKnown RBP5.37□□□□□ -1.55
LINC00254-201ENST00000563416 CCT4P50991 539 aaKnown RBP5.37□□□□□ -1.55
LINC00254-201ENST00000563416 BLMHQ13867 455 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 BTBD16Q32M84 506 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 TBRG1Q3YBR2 411 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 NFRKBQ6P4R8 1299 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 LRIG3Q6UXM1 1119 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 G2E3Q7L622 706 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 RAB11FIP2Q7L804 512 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 CCDC117Q8IWD4 279 aaPredicted RBP5.37□□□□□ -1.55
LINC00254-201ENST00000563416 SPATA5Q8NB90 893 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 SLC44A5Q8NCS7 719 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 MASTLQ96GX5 879 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 RMDN3Q96TC7 470 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 UTP14AQ9BVJ6 771 aaKnown RBP5.37□□□□□ -1.55
LINC00254-201ENST00000563416 TMEM120AQ9BXJ8 343 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 BRD8Q9H0E9 1235 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 FOXP1Q9H334 677 aaPredicted RBP5.37□□□□□ -1.55
LINC00254-201ENST00000563416 ZHX3Q9H4I2 956 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 POT1Q9NUX5 634 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 DACT1Q9NYF0 836 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 LRFN1Q9P244 771 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 HEY2Q9UBP5 337 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 PGAP2Q9UHJ9 254 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 SH3TC1Q8TE82 1336 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 ADAMTSL1Q8N6G6 1762 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 TRPM7Q96QT4 1865 aa5.37□□□□□ -1.55
LINC00254-201ENST00000563416 CYP3A7-CYP3A51PA0A087WV96 503 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 LY6G6EA0A0G2JKS1 128 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 PI4KAP2A4QPH2 592 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 MBD3L5A6NJ08 208 aaPredicted RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 SLC38A8A6NNN8 435 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 TCERG1O14776 1098 aaKnown RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 UGDHO60701 494 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 ACTL6BO94805 426 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 IGKV5-2P06315 115 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 CYP3A7P24462 503 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 SERPINF1P36955 418 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 CDK7P50613 346 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 AP2B1P63010 937 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 FOXD4Q12950 439 aaPredicted RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 MTX1Q13505 466 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 RPS6KA2Q15349 733 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 ALDH1L2Q3SY69 923 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 ISM2Q6H9L7 571 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 PI4KAP1Q8N8J0 262 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 ARL14EPQ8N8R7 260 aaPredicted RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 NRACQ8N912 160 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 CCDC191Q8NCU4 936 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 OR52N4Q8NGI2 321 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 WIPF2Q8TF74 440 aaPredicted RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 CPT1BQ92523 772 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 CCT6BQ92526 530 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 MLXIPQ9HAP2 919 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 MAP3K20Q9NYL2 800 aaKnown RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 AGO2Q9UKV8 859 aaKnown RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.36□□□□□ -1.55
LINC00254-201ENST00000563416 SCINQ9Y6U3 715 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 ZBED9Q6R2W3 1325 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 CDHR2Q9BYE9 1310 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 COL4A5P29400 1685 aa5.36□□□□□ -1.55
LINC00254-201ENST00000563416 RTL9Q8NET4 1388 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 MYMKA6NI61 221 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 TULP3O75386 442 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 KAT7O95251 611 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 CSTBP04080 98 aaKnown RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 PCCAP05165 728 aaPredicted RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 ALDOCP09972 364 aaKnown RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 CASP2P42575 452 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 GRK6P43250 576 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 PCP4P48539 62 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 FOXL2P58012 376 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 GALNT1Q10472 559 aaPredicted RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 DLGAP5Q15398 846 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 CCDC38Q502W7 563 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 MMS22LQ6ZRQ5 1243 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 PIP4P1Q86T03 277 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 PIM3Q86V86 326 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 SLC44A2Q8IWA5 706 aaPredicted RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 ADGRF3Q8IZF5 1079 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 PAQR4Q8N4S7 273 aaPredicted RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 DNAAF4Q8WXU2 420 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 TRIM63Q969Q1 353 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 ZNF622Q969S3 477 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 CLMNQ96JQ2 1002 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 MECRQ9BV79 373 aa5.35□□□□□ -1.55
LINC00254-201ENST00000563416 ELAC1Q9H777 363 aaKnown RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 CWC25Q9NXE8 425 aaPredicted RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 TRMT112Q9UI30 125 aaKnown RBP5.35□□□□□ -1.55
LINC00254-201ENST00000563416 C19orf53Q9UNZ5 99 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms