RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CD248Q9HCU0 757 aa19.09■□□□□ 0.65
RAB40C-207ENST00000563109 SCUBE2Q9NQ36 999 aa19.09■□□□□ 0.65
RAB40C-207ENST00000563109 KLHL8Q9P2G9 620 aaPredicted RBP19.09■□□□□ 0.65
RAB40C-207ENST00000563109 DNPEPQ9ULA0 475 aa19.09■□□□□ 0.65
RAB40C-207ENST00000563109 ADH1BP00325 375 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 IL1BP01584 269 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 HLA-DQB2P05538 268 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 GABRG2P18507 467 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 NDUFV2P19404 249 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 PTPN3P26045 913 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 CHRNA3P32297 505 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 PSMD8P48556 350 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 CSNK1DP48730 415 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 SCNN1BP51168 640 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 COPAP53621 1224 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 AP1S1P61966 158 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 SNX1Q13596 522 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 MYLK3Q32MK0 819 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 RALGPS1Q5JS13 557 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 FAM46CQ5VWP2 391 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 SRLQ86TD4 932 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 CACUL1Q86Y37 369 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 TMPRSS6Q8IU80 811 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 MMAAQ8IVH4 418 aaKnown RBP19.08■□□□□ 0.64
RAB40C-207ENST00000563109 CHST14Q8NCH0 376 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 NKD2Q969F2 451 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-207ENST00000563109 SIPA1Q96FS4 1042 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 LRIG1Q96JA1 1093 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 AGAP3Q96P47 875 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 NUDCD1Q96RS6 583 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 AP1M1Q9BXS5 423 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 CEP41Q9BYV8 373 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 SMARCAL1Q9NZC9 954 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 EVLQ9UI08 416 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF148Q9UQR1 794 aa19.08■□□□□ 0.64
RAB40C-207ENST00000563109 K7ESF4 209 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 MUSKO15146 869 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 DNTTP04053 509 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 ACADMP11310 421 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 CES1P23141 567 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 RGRP47804 291 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 MAXP61244 160 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 ZBTB16Q05516 673 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 SFSWAPQ12872 951 aaKnown RBP19.07■□□□□ 0.64
RAB40C-207ENST00000563109 CST6Q15828 149 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 TTC31Q49AM3 519 aaPredicted RBP19.07■□□□□ 0.64
RAB40C-207ENST00000563109 TEX44Q53QW1 395 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 DRICH1Q6PGQ1 229 aaPredicted RBP19.07■□□□□ 0.64
RAB40C-207ENST00000563109 PGBD5Q8N414 524 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 PIP4K2CQ8TBX8 421 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 PPP1R16AQ96I34 528 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 MRGPRX1Q96LB2 322 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 TUBGCP5Q96RT8 1024 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 FAM129BQ96TA1 746 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 TMEM121Q9BTD3 319 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 LRFN3Q9BTN0 628 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 OSBPL1AQ9BXW6 950 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 MKRN2Q9H000 416 aaKnown RBP19.07■□□□□ 0.64
RAB40C-207ENST00000563109 ATP13A3Q9H7F0 1226 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 C10orf88Q9H8K7 445 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 DYRK4Q9NR20 520 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 FBXO4Q9UKT5 387 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 TRHDEQ9UKU6 1024 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 ATP8A1Q9Y2Q0 1164 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 ANKRD36A6QL64 1941 aa19.07■□□□□ 0.64
RAB40C-207ENST00000563109 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-207ENST00000563109 KPNA3O00505 521 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-207ENST00000563109 LEFTY1O75610 366 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 ITGAVP06756 1048 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 RPS14P62263 151 aaKnown RBP19.06■□□□□ 0.64
RAB40C-207ENST00000563109 CSTF1Q05048 431 aaKnown RBP19.06■□□□□ 0.64
RAB40C-207ENST00000563109 WASHC5Q12768 1159 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 OASLQ15646 514 aaKnown RBP19.06■□□□□ 0.64
RAB40C-207ENST00000563109 CFAP58Q5T655 872 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 ITPRIPL1Q6GPH6 555 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 RASSF3Q86WH2 238 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 CREG2Q8IUH2 290 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 PAF1Q8N7H5 531 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 PRELID2Q8N945 189 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 FAM71DQ8N9W8 422 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 TMIEQ8NEW7 156 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 MDGA1Q8NFP4 955 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 KIF18AQ8NI77 898 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF419Q96HQ0 510 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-207ENST00000563109 SEMA3CQ99985 751 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 SCML1Q9UN30 329 aa19.06■□□□□ 0.64
RAB40C-207ENST00000563109 INSIG1O15503 277 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 URI1O94763 535 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 C5AR1P21730 350 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 CA4P22748 312 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 SERPINA4P29622 427 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 HOXA6P31267 233 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 STIP1P31948 543 aaKnown RBP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 ACTN2P35609 894 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 NRLP54845 237 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 LMNB2Q03252 620 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 BCL2L1Q07817 233 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 ARSIQ5FYB1 569 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 ALG1LQ6GMV1 187 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 GSTA5Q7RTV2 222 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms