RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 JUNDP17535 347 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 GKP32189 559 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 ACVRL1P37023 503 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 THOP1P52888 689 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 GEMIN4P57678 1058 aaKnown RBP13.21□□□□□ -0.29
SF3B3-202ENST00000562722 TMPRSS3P57727 454 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 DEFB133Q30KQ1 61 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 TAF1BQ53T94 588 aaPredicted RBP13.21□□□□□ -0.29
SF3B3-202ENST00000562722 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 TRNP1Q6NT89 227 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 LEKR1Q6ZMV7 388 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 PHLDB2Q86SQ0 1253 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 NOP9Q86U38 636 aaKnown RBP13.21□□□□□ -0.29
SF3B3-202ENST00000562722 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 FAM181AQ8N9Y4 354 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 NCKIPSDQ9NZQ3 722 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 PPARGC1AQ9UBK2 798 aaKnown RBP13.21□□□□□ -0.29
SF3B3-202ENST00000562722 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 ITM2BQ9Y287 266 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 GTF3C3Q9Y5Q9 886 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 ASXL3Q9C0F0 2248 aa13.21□□□□□ -0.29
SF3B3-202ENST00000562722 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 C1QL1O75973 258 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 UGT2B4P06133 528 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 RBMS1P29558 406 aaKnown RBP13.2□□□□□ -0.3
SF3B3-202ENST00000562722 SDC4P31431 198 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 ABL2P42684 1182 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 LSSP48449 732 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 NR0B2Q15466 257 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 ZNF805Q5CZA5 627 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 C3orf38Q5JPI3 329 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 MIIPQ5JXC2 388 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
SF3B3-202ENST00000562722 LSM14AQ8ND56 463 aaKnown RBP13.2□□□□□ -0.3
SF3B3-202ENST00000562722 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 IL12RB2Q99665 862 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 SYNDIG1Q9H7V2 258 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 THSD1Q9NS62 852 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 GPR27Q9NS67 375 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 ZNF212Q9UDV6 495 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 DACH1Q9UI36 760 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 TMEM59LQ9UK28 342 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 CSNK1G3Q9Y6M4 447 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 U3KQA8 63 aa13.2□□□□□ -0.3
SF3B3-202ENST00000562722 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-202ENST00000562722 F8VZ95 297 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 MUSKO15146 869 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 KLK10O43240 276 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 RAMP2O60895 175 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 UCHL3P15374 230 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 TGM2P21980 687 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 RPIAP49247 311 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 UCNP55089 124 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ERVPABLB-1P60509 514 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 SNRPD1P62314 119 aaKnown RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 NOMO3P69849 1222 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 PTK2BQ14289 1009 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ISXQ2M1V0 245 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 C15orf59Q2T9L4 293 aaPredicted RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 DPCR1Q3MIW9 517 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 LRRC73Q5JTD7 316 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ARHGAP40Q5TG30 622 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 GUSBP11Q6P575 273 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 RBM44Q6ZP01 1051 aaKnown RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 OR2AP1Q8NGE2 309 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 BTN2A2Q8WVV5 523 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 RXFP2Q8WXD0 754 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ARHGEF2Q92974 986 aaKnown RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 GLMNQ92990 594 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ISG20Q96AZ6 181 aaKnown RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 VCPIP1Q96JH7 1222 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 LENG8Q96PV6 779 aaPredicted RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 C11orf70Q9BRQ4 267 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 C1QTNF2Q9BXJ5 285 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 STK33Q9BYT3 514 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 APOBEC3BQ9UH17 382 aaKnown RBP13.19□□□□□ -0.3
SF3B3-202ENST00000562722 KLF15Q9UIH9 416 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 SATB2Q9UPW6 733 aa13.19□□□□□ -0.3
SF3B3-202ENST00000562722 SPINT1O43278 529 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 BUB1O43683 1085 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 GFPT2O94808 682 aa13.18□□□□□ -0.3
SF3B3-202ENST00000562722 GSRP00390 522 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms