RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 ZNF599Q96NL3 588 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 OSBPL1AQ9BXW6 950 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 MAK16Q9BXY0 300 aaKnown RBP16.67■□□□□ 0.26
PKD1-226ENST00000562425 C6orf106Q9H6K1 298 aaPredicted RBP16.67■□□□□ 0.26
PKD1-226ENST00000562425 ZDHHC6Q9H6R6 413 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 GRPEL1Q9HAV7 217 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 ETNK2Q9NVF9 386 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 KLHL11Q9NVR0 708 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 SERGEFQ9UGK8 458 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 EVLQ9UI08 416 aaPredicted RBP16.67■□□□□ 0.26
PKD1-226ENST00000562425 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKD1-226ENST00000562425 ALG6Q9Y672 507 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 WASF2Q9Y6W5 498 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 CHD5Q8TDI0 1954 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 LAMA1P25391 3075 aa16.67■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3DA0A087WVF3 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3IA0A087WXS9 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3EA0A087X179 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3KA0A087X1G2 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3FA6NER0 549 aaPredicted RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 FAM47DPA6NHR8 397 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3LB9A6J9 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 PJA2O43164 708 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 NRDCO43847 1150 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 LEFTY1O75610 366 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 FSBPO95073 299 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3HP0C7X1 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TNNT1P13805 278 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 RENBPP51606 427 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 KIF5AQ12840 1032 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 GRM3Q14832 879 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 PAFAH1B3Q15102 231 aaKnown RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 CYTH1Q15438 398 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 CCDC6Q16204 474 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 POM121L1PQ3SYA9 428 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 AASDHQ4L235 1098 aaPredicted RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 KIAA0895LQ68EN5 471 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3GQ6DHY5 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3CQ6IPX1 549 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 DAAM2Q86T65 1068 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TBC1D3Q8IZP1 549 aaPredicted RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 BBS5Q8N3I7 341 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 ACRBPQ8NEB7 543 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 PCDH19Q8TAB3 1148 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 RAPGEF5Q92565 580 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 FAM131CQ96AQ9 280 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 FAF2Q96CS3 445 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 RNF157Q96PX1 679 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 NUSAP1Q9BXS6 441 aaKnown RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 HDAC8Q9BY41 377 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 TMEM74BQ9NUR3 256 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
PKD1-226ENST00000562425 MFHAS1Q9Y4C4 1052 aa16.66■□□□□ 0.26
PKD1-226ENST00000562425 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 PSTPIP1O43586 416 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 KRT1P04264 644 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 ZFXP17010 805 aaPredicted RBP16.65■□□□□ 0.26
PKD1-226ENST00000562425 ITGB7P26010 798 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 CCR5P51681 352 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 ADPRHP54922 357 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 ATXN7L2Q5T6C5 722 aaPredicted RBP16.65■□□□□ 0.26
PKD1-226ENST00000562425 SLC23A3Q6PIS1 610 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 NCEH1Q6PIU2 408 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 ERN2Q76MJ5 926 aaKnown RBP16.65■□□□□ 0.26
PKD1-226ENST00000562425 TPCN2Q8NHX9 752 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 SNX19Q92543 992 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 BIRC7Q96CA5 298 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 CINPQ9BW66 212 aaPredicted RBP16.65■□□□□ 0.26
PKD1-226ENST00000562425 MIR1-1HGQ9H1L0 117 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 SEPT3Q9UH03 358 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 TFR2Q9UP52 801 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 HYOU1Q9Y4L1 999 aa16.65■□□□□ 0.26
PKD1-226ENST00000562425 A0A1B0GTW7 788 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 ARHGAP6O43182 974 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
PKD1-226ENST00000562425 GDF9O60383 454 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 CFIP05156 583 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 SERPINF2P08697 491 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 MX2P20592 715 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 CD27P26842 260 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 MAOBP27338 520 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 NUDT1P36639 197 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 HSPA9P38646 679 aaKnown RBP16.64■□□□□ 0.25
PKD1-226ENST00000562425 CSNK1DP48730 415 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 NEK3P51956 506 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 METAP1P53582 386 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 SHC2P98077 582 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 NSUN2Q08J23 767 aaKnown RBP eCLIP16.64■□□□□ 0.25
PKD1-226ENST00000562425 LBRQ14739 615 aaKnown RBP16.64■□□□□ 0.25
PKD1-226ENST00000562425 SF3A2Q15428 464 aaKnown RBP16.64■□□□□ 0.25
PKD1-226ENST00000562425 ZNF805Q5CZA5 627 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 TRIM61Q5EBN2 209 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 AGBL4Q5VU57 503 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 NCBP2-AS2Q69YL0 99 aa16.64■□□□□ 0.25
PKD1-226ENST00000562425 NEK5Q6P3R8 708 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms