RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
PKD1-225ENST00000562297 GGA2Q9UJY4 613 aa16.78■□□□□ 0.28
PKD1-225ENST00000562297 TCAF1Q9Y4C2 921 aa16.78■□□□□ 0.28
PKD1-225ENST00000562297 GBF1Q92538 1859 aa16.78■□□□□ 0.28
PKD1-225ENST00000562297 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.77■□□□□ 0.28
PKD1-225ENST00000562297 ITGA2BP08514 1039 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 SYN1P17600 705 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 ITKQ08881 620 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 ZNF177Q13360 481 aaPredicted RBP16.77■□□□□ 0.28
PKD1-225ENST00000562297 C6orf89Q6UWU4 347 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 KCNMB4Q86W47 210 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 SPOCK2Q92563 424 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 EMILIN2Q9BXX0 1053 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 POLR1EQ9GZS1 481 aaKnown RBP16.77■□□□□ 0.28
PKD1-225ENST00000562297 TREX1Q9NSU2 369 aa16.77■□□□□ 0.28
PKD1-225ENST00000562297 LINC01553A4QN01 128 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 COPEO14579 308 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 GLUD1P00367 558 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 RHOCP08134 193 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 ARNTP27540 789 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 CLCN4P51793 760 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 SLC7A9P82251 487 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 PLPP4Q5VZY2 271 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 IL31Q6EBC2 164 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 MAB21L3Q8N8X9 362 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 SLC22A17Q8WUG5 538 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 POF1BQ8WVV4 589 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 MRPS31Q92665 395 aaKnown RBP16.77■□□□□ 0.27
PKD1-225ENST00000562297 SEMA3CQ99985 751 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 MGME1Q9BQP7 344 aa16.77■□□□□ 0.27
PKD1-225ENST00000562297 C20orf96Q9NUD7 363 aaPredicted RBP16.77■□□□□ 0.27
PKD1-225ENST00000562297 LOC285095A0A1B0GVY8 99 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 CCDC78A2IDD5 438 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 ARHGEF15O94989 841 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 ATXN1LP0C7T5 689 aaKnown RBP16.76■□□□□ 0.27
PKD1-225ENST00000562297 ALADP13716 330 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 ARCN1P48444 511 aaKnown RBP16.76■□□□□ 0.27
PKD1-225ENST00000562297 CAMK1Q14012 370 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 ZNF235Q14590 738 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 STXBP5Q5T5C0 1151 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 GRTP1Q5TC63 336 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 ARMC3Q5W041 872 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 CGB2Q6NT52 195 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 CACNA2D3Q8IZS8 1091 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 PPHLN1Q8NEY8 458 aaKnown RBP16.76■□□□□ 0.27
PKD1-225ENST00000562297 ATP2A3Q93084 1043 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 ISL2Q96A47 359 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 FAM111AQ96PZ2 611 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 PSKH2Q96QS6 385 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 RBBP8Q99708 897 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 C17orf80Q9BSJ5 609 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 VPS11Q9H270 941 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 PLLPQ9Y342 182 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 MYOFQ9NZM1 2061 aa16.76■□□□□ 0.27
PKD1-225ENST00000562297 A0A1W2PRU2 124 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 SNX3O60493 162 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CSPG5O95196 566 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CKMP06732 381 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 F7P08709 466 aaPredicted RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 CRHR1P34998 444 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CCR2P41597 374 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 OXCT1P55809 520 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 ZKSCAN8Q15776 578 aaPredicted RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 PDPK2PQ6A1A2 396 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 ESRP1Q6NXG1 681 aaKnown RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 SLC25A41Q8N5S1 370 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 NSMCE3Q96MG7 304 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 ELAC2Q9BQ52 826 aaKnown RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 SPON2Q9BUD6 331 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 NSRP1Q9H0G5 558 aaKnown RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 PCMTD2Q9NV79 361 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 SLC2A6Q9UGQ3 507 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CEP290O15078 2479 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 GOLGA8TH3BQL2 631 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 TPP1O14773 563 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CCL16O15467 120 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 C1RP00736 705 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 GJA1P17302 382 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CDC25CP30307 473 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 MAGEA12P43365 314 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 SERPINH1P50454 418 aaKnown RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 LIMK2P53671 638 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 SIRPB2Q5JXA9 342 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 ZNF783Q6ZMS7 281 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 HTR3DQ70Z44 454 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 STRA8Q7Z7C7 330 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 SPATS2Q86XZ4 545 aaKnown RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 CNTN4Q8IWV2 1026 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 NDUFAF2Q8N183 169 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 ACMSDQ8TDX5 336 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 ZNF75CPQ92670 426 aaPredicted RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 RANBP9Q96S59 729 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 UBA2Q9UBT2 640 aaPredicted RBP16.75■□□□□ 0.27
PKD1-225ENST00000562297 SEPT3Q9UH03 358 aa16.75■□□□□ 0.27
PKD1-225ENST00000562297 C5orf67F2Z3F1 127 aa16.74■□□□□ 0.27
PKD1-225ENST00000562297 TBL1XO60907 577 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms