RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 VHLP40337 213 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 MGAT5Q09328 741 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 MSLNQ13421 630 aaPredicted RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 RAB33AQ14088 237 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 RCN2Q14257 317 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 PDK4Q16654 411 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF449Q6P9G9 518 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 KLHDC10Q6PID8 442 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 KDELC1Q6UW63 502 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 TFAP2DQ7Z6R9 452 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 LRRC49Q8IUZ0 686 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 CCNJLQ8IV13 435 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 CMTR2Q8IYT2 770 aaKnown RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 ATP6V0D2Q8N8Y2 350 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 TCP10LQ8TDR4 215 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 INPP5DQ92835 1189 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF558Q96NG5 402 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 APOL2Q9BQE5 337 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 SPATA16Q9BXB7 569 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 LRRC40Q9H9A6 602 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 MKS1Q9NXB0 559 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 IL1RAPL1Q9NZN1 696 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 IPO11Q9UI26 975 aaKnown RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 HBS1LQ9Y450 684 aaKnown RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 YIPF1Q9Y548 306 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 COMMD3-BMI1R4GMX3 469 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 COCHO43405 550 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZWINTO95229 277 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 MT-ND3P03897 115 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 MMP2P08253 660 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TACR2P21452 398 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TUFMP49411 452 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ANKRD20A4Q4UJ75 823 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TPGS2Q68CL5 300 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 LVRNQ6Q4G3 990 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PACS1Q6VY07 963 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 DDX53Q86TM3 631 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 CTAGE3PQ8IX95 158 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PGBD5Q8N414 524 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 OR52K2Q8NGK3 314 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ALKBH8Q96BT7 664 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PPP1R14BQ96C90 147 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 APOPT1Q96IL0 206 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF778Q96MU6 729 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 NAT9Q9BTE0 207 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ATP13A1Q9HD20 1204 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 MAGED2Q9UNF1 606 aaPredicted RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TBC1D30Q9Y2I9 924 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 KIAA1671Q9BY89 1806 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 FAM237BA0A1B0GVD1 139 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TM9SF1O15321 606 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 GREM1O60565 184 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 GSRP00390 522 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ALDOAP04075 364 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PRKCGP05129 697 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 SPATA31D3P0C874 917 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ACRP10323 421 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 HSPA8P11142 646 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF24P17028 368 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TPH1P17752 444 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 NPY2RP49146 381 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 CSRP3P50461 194 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 SH3BGRP55822 239 aaPredicted RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 SPANXN3Q5MJ09 141 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 CES4AQ5XG92 561 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 RANBP10Q6VN20 620 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 SPATA31D4Q6ZUB0 917 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 SMYD1Q8NB12 490 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ATP2A3Q93084 1043 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 ISL2Q96A47 359 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 MFSD3Q96ES6 412 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 TRMT2BQ96GJ1 504 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PRICKLE1Q96MT3 831 aaPredicted RBP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 KIFC1Q9BW19 673 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 RNF38Q9H0F5 515 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 DCLRE1BQ9H816 532 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 PDFQ9HBH1 243 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 RBM22Q9NW64 420 aaKnown RBP eCLIP10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 STOML1Q9UBI4 398 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 SOX13Q9UN79 622 aa10.37□□□□□ -0.75
TUBGCP4-202ENST00000561691 CHD5Q8TDI0 1954 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 GFRA2O00451 464 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 NRG2O14511 850 aaPredicted RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 USP1O94782 785 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 TOP3BO95985 862 aaKnown RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ERVK-10P10266 1014 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ARNTP27540 789 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ACVRL1P37023 503 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 MAGEA12P43365 314 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 IL9RQ01113 521 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 SULT2A1Q06520 285 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms