RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 TM6SF2Q9BZW4 377 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 ETNK1Q9HBU6 452 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 RAB6BQ9NRW1 208 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 MUTYHQ9UIF7 546 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 PLA2G4CQ9UP65 541 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 SLC8A2Q9UPR5 921 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 PLXNA2O75051 1894 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 TRPM6Q9BX84 2022 aa12.84□□□□□ -0.35
CMTM4-203ENST00000561680 EDDM13A0A1B0GTR0 161 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 KRBA1A5PL33 1030 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ANTXRLA6NF34 631 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 F5H423 210 aaPredicted RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 GJB3O75712 270 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 SEC31AO94979 1220 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 IGSF6O95976 241 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 CES1P23141 567 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 PRKCHP24723 683 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ADCY8P40145 1251 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 IL12RB1P42701 662 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 MAGEA6P43360 314 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 STARD6P59095 220 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 AP1S1P61966 158 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 BASP1P80723 227 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 GUCY2DQ02846 1103 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ITKQ08881 620 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 HNRNPA1L2Q32P51 320 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 RNASEH2BQ5TBB1 312 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 EMC10Q5UCC4 262 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 IZUMO3Q5VZ72 239 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 SERPINA13PQ6UXR4 307 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 Q6ZVU0 165 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 PRPF39Q86UA1 669 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 TAB3Q8N5C8 712 aaPredicted RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 OR2AP1Q8NGE2 309 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 CPT1BQ92523 772 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 UBXN4Q92575 508 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 RUBCNQ92622 972 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 OXNAD1Q96HP4 312 aaPredicted RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 DPH5Q9H2P9 285 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ANKZF1Q9H8Y5 726 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 EIF2B3Q9NR50 452 aaKnown RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 GRHL1Q9NZI5 618 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 WHRNQ9P202 907 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 FBXL21Q9UKT6 434 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 V9GYY5 206 aaPredicted RBP12.83□□□□□ -0.36
CMTM4-203ENST00000561680 NUMA1Q14980 2115 aa12.83□□□□□ -0.36
CMTM4-203ENST00000561680 ESYT3A0FGR9 886 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 TTC24A2A3L6 582 aaPredicted RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 TP73O15350 636 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 INSIG1O15503 277 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 ANXA9O76027 345 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SERPINF2P08697 491 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 HLA-EP13747 358 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 TPSB2P20231 275 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 CD72P21854 359 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 TIE1P35590 1138 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 CD86P42081 329 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 MAPK8P45983 427 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SCNN1BP51168 640 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 CCNHP51946 323 aaPredicted RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 GEMP55040 296 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SEC13P55735 322 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 MRPS21P82921 87 aaKnown RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SKOR1P84550 965 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 MPP3Q13368 585 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 PRPSAP1Q14558 356 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 IHHQ14623 411 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 TPSAB1Q15661 275 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 ERCC6LQ2NKX8 1250 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 CARD16Q5EG05 197 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 KCTD11Q693B1 232 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SRLQ86TD4 932 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 HOOK3Q86VS8 718 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 ZNF366Q8N895 744 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 OR2A12Q8NGT7 310 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SPATA22Q8NHS9 363 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 PTPRN2Q92932 1015 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SHDQ96IW2 340 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 NSMCE3Q96MG7 304 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 NECAB3Q96P71 396 aaPredicted RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 RBM15Q96T37 977 aaKnown RBP eCLIP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 ACOX2Q99424 681 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms